DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pdxk and pdxkb

DIOPT Version :9

Sequence 1:NP_996031.1 Gene:Pdxk / 39066 FlyBaseID:FBgn0085484 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001139058.1 Gene:pdxkb / 564697 ZFINID:ZDB-GENE-030616-521 Length:306 Species:Danio rerio


Alignment Length:306 Identity:145/306 - (47%)
Similarity:204/306 - (66%) Gaps:22/306 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RVLSIQSHVVHGYVGNKVATYPLQLLGFDVDPLNSVQFSNHTGYKTFKGPVSNEKELATIFEGLE 75
            ||||||||||.||||||.|::|||::||:||.:|||||||||||..:||.|....||..::||::
Zfish     4 RVLSIQSHVVRGYVGNKSASFPLQVMGFEVDSINSVQFSNHTGYAHWKGQVLTADELHVLYEGIK 68

  Fly    76 ENELLPLYSHLLTGYIGNPLFLRQVGHILKKLRQANPGLVYVCDPVMGDNGQLYVPKELLPVYRD 140
            .|. :..|.::||||..:..||..|..|:::|::|||.||||||||:||:|.:|||:.|.|||::
Zfish    69 LNN-VNHYDYVLTGYNRDTSFLEMVADIVQELKRANPNLVYVCDPVLGDHGSMYVPQNLHPVYKN 132

  Fly   141 EIIPLADIITPNQFEVELLTEKEVRSEAAVWEAMEWFHQRGIKTVVISSSDLGQPGVLRAFL--- 202
            :::|:||||||||||.||||.|.:.:|....|.|:..|:.|..||||:|||| .|.:...||   
Zfish   133 KVVPVADIITPNQFEAELLTGKNISTEKDAVEVMDLLHKMGPDTVVITSSDL-PPRLGDRFLVSL 196

  Fly   203 -SQ--------QNGPRLAIDIPKQGGKDLVFTGTGDLFASLFLAHSHG-SKDIANVFEKTIASLQ 257
             ||        :...|:.|::||   .|.||.|||||||::.||.:|. ..|:....|||.:.:.
Zfish   197 GSQRILMPDGTRTTQRIRIEVPK---VDAVFVGTGDLFAAMLLAWTHHYPTDLKTACEKTFSVMH 258

  Fly   258 AVIKRTVA---SLPNGGNGPVKAAERELKLVQSKTEIEQPQVLLKA 300
            .||:||::   .:...|..| ..::.||::||||.:||.|.::::|
Zfish   259 HVIQRTISYAHEMAGPGRRP-SPSQLELRMVQSKADIEDPAIVMEA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdxkNP_996031.1 ribokinase_pfkB_like 11..303 CDD:294126 145/306 (47%)
pdxkbNP_001139058.1 ribokinase_pfkB_like 4..304 CDD:294126 145/306 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595244
Domainoid 1 1.000 154 1.000 Domainoid score I4215
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2731
Inparanoid 1 1.050 270 1.000 Inparanoid score I2983
OMA 1 1.010 - - QHG53875
OrthoDB 1 1.010 - - D1091630at2759
OrthoFinder 1 1.000 - - FOG0002400
OrthoInspector 1 1.000 - - otm24541
orthoMCL 1 0.900 - - OOG6_102185
Panther 1 1.100 - - LDO PTHR10534
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1806
SonicParanoid 1 1.000 - - X1589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

Return to query results.
Submit another query.