DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pdxk and pdxk-1

DIOPT Version :9

Sequence 1:NP_996031.1 Gene:Pdxk / 39066 FlyBaseID:FBgn0085484 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_491464.2 Gene:pdxk-1 / 172101 WormBaseID:WBGene00019008 Length:331 Species:Caenorhabditis elegans


Alignment Length:295 Identity:132/295 - (44%)
Similarity:183/295 - (62%) Gaps:22/295 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KRVLSIQSHVVHGYVGNKVATYPLQLLGFDVDPLNSVQFSNHTGYKTFKGPVSNEKELATIFEGL 74
            :|||||||||||||.|||.:.:||||.||:||.:||||||||.||:..||....||||..::|||
 Worm    36 RRVLSIQSHVVHGYAGNKCSVFPLQLHGFEVDFINSVQFSNHAGYEHVKGQKLTEKELEELYEGL 100

  Fly    75 EENELLPLYSHLLTGYIGNPLFLRQVGHILKKLRQANPGLVYVCDPVMGDNGQLYVPKELLPVYR 139
            ..|. :..|:|:||||.||..||:::..::|.|::.|....:||||||||||:.|.||||:||||
 Worm   101 TLNN-INNYTHVLTGYCGNVTFLQKIADVVKDLKKKNGNTTFVCDPVMGDNGRYYTPKELMPVYR 164

  Fly   140 DEIIPLADIITPNQFEVELLTEKEVRSEAAVWEAMEWFHQRGIKTVVISSSDLGQPGV-----LR 199
            |.||||||::|||.||:..||...:.:|.....|:...|.:|:||||::|   |..|.     ||
 Worm   165 DLIIPLADVLTPNAFELGELTGSPIETEEDCLRAVNELHAKGVKTVVVTS---GVTGAQTNESLR 226

  Fly   200 AFLSQQNGPRLAIDIPKQGGKDLVFTGTGDLFASL---FLAHSHGSKDIANVFEKTIASLQAVIK 261
            .:.|.:.........|:..|:   |.||||.|.||   :|...:|  |::...::.:||:|.:|:
 Worm   227 CYASVKGSHVYRFTFPRLVGQ---FVGTGDTFTSLLVVWLDELNG--DVSEAVKRVLASMQCLIR 286

  Fly   262 RT--VASLPNGGNGPVKAAERELKLVQSKTEIEQP 294
            :|  .|.|....|   ..|..||:|:||:.::..|
 Worm   287 KTSSYAQLQVDTN---SRAMCELRLIQSRKDLLWP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PdxkNP_996031.1 ribokinase_pfkB_like 11..303 CDD:294126 132/294 (45%)
pdxk-1NP_491464.2 ribokinase_pfkB_like 37..320 CDD:381848 132/294 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166730
Domainoid 1 1.000 121 1.000 Domainoid score I3535
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2731
Inparanoid 1 1.050 222 1.000 Inparanoid score I2274
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53875
OrthoDB 1 1.010 - - D1091630at2759
OrthoFinder 1 1.000 - - FOG0002400
OrthoInspector 1 1.000 - - oto19245
orthoMCL 1 0.900 - - OOG6_102185
Panther 1 1.100 - - LDO PTHR10534
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1806
SonicParanoid 1 1.000 - - X1589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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