DRSC/TRiP Functional Genomics Resources

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Protein Alignment UGP and Uap1l1

DIOPT Version :9

Sequence 1:NP_648300.3 Gene:UGP / 39065 FlyBaseID:FBgn0035978 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001127988.1 Gene:Uap1l1 / 296560 RGDID:1310630 Length:507 Species:Rattus norvegicus


Alignment Length:548 Identity:117/548 - (21%)
Similarity:195/548 - (35%) Gaps:140/548 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RPIDVLLERAGVRGH------QRAPSDSKEFHEVTKRDAL--RLLEHDVDRLLETTEKARQPALK 62
            |.:...|:||| :.|      ..||.         .|.||  .|...:.|.|.|..::|...:..
  Rat     5 RDVRAKLQRAG-QDHLLRFWADLAPE---------LRAALLAELSSLEADALREHCQRASAASAL 59

  Fly    63 AEMGRFADLFGRFIQEEGPALDWNKIQKLPE----NAVMNYSNLKSPKNEQNEIRNMLDKLVVIK 123
            |. |...||..|             :|.||.    :|:......:....|:...:..|:|:.|:.
  Rat    60 AS-GPLPDLAAR-------------LQPLPPERLGSAIRCDQETRLRWEEEGFRQIALNKVAVLL 110

  Fly   124 LNGGLGTSMGCHGPKSV--IPVRSDLTFLDLTVQQIEHLNK-------TYDANVPLVLMNSFNTD 179
            |.||.||.:|...||.:  :.:.|..|...|..::|..:.:       |: ..||..:|.|..|.
  Rat   111 LAGGQGTRLGVTYPKGMYQVGLPSQKTLYQLQAERIRRVQQLAGQRLGTH-CTVPWYIMTSEFTL 174

  Fly   180 EDTEKIVRKYKGFRV---QIHTFNQSCFPRISREHYLPVAKDFDVEKDMEAWYPPGHGDFYDTFR 241
            ..|.|..:::..|.:   .:..|.|...|.::.|     .|.....||..|..|.|:|..|....
  Rat   175 GPTIKFFKEHDFFHLDPANVVLFEQRMLPAVTFE-----GKAILERKDKVAMAPDGNGGLYCALA 234

  Fly   242 NSGLLKKFIEEGREYCFLSNIDNL----------------GATVDLNILNKLVGEERATTPVEFV 290
            :..:|:...:.|.|:..:..:||:                ||.....::.|...||    ||   
  Rat   235 DHQILEDMEQRGVEFVHVYCVDNILVRLADPAFIGFCVLQGADCGAKVVEKAYPEE----PV--- 292

  Fly   291 MEVTDKTRADVKGGTLIQMENKLRLLEIAQVPPEHVDDFKSVKTFKFFNTNNI---WANLAAIDR 352
                         |.:.|::...:::|.:::.|| :...........:|..||   :.....:|.
  Rat   293 -------------GVVCQVDGVPQVVEYSEISPE-IARQCGADGGLLYNAGNICNHFFTRGFLDM 343

  Fly   353 VLRERTLNMEIIVNNKTL----ENGTRV-------IQLETAVGAAMKCFDGAIGINVPR-SRFLP 405
            |:||....:::.|..|.:    |.|..|       |::|..|...:......:...|.| ..|.|
  Rat   344 VIREFEPLLKLHVAVKKVPYVDEEGNLVKPLRPNGIKMEKFVFDVLPFAKNFVAFEVCREEEFSP 408

  Fly   406 VKK-----------SSDLLLVMSNLYTLKNGSLVM-----------------SPQRMFPTTPLVK 442
            :|.           |...|||....:.|:.|:..:                 .|..:...:|||.
  Rat   409 LKNADTADRDNPSTSRRALLVQHYRWALQAGAHFLDVHGVQLPEQSGLLPNGDPPAICEISPLVS 473

  Fly   443 L-GENHFSKVKEFL-GRFANIPDIIELD 468
            . ||.    ::.:| ||....|.|::.|
  Rat   474 YSGEG----LETYLQGRKLQSPFILDED 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UGPNP_648300.3 UDPGP 68..485 CDD:396322 99/478 (21%)
Uap1l1NP_001127988.1 UDPGlcNAc_PPase 92..413 CDD:133036 74/347 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4284
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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