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Protein Alignment PGRP-LF and pglyrp6
DIOPT Version :9
Sequence 1: | NP_648299.3 |
Gene: | PGRP-LF / 39064 |
FlyBaseID: | FBgn0035977 |
Length: | 369 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001038687.2 |
Gene: | pglyrp6 / 571817 |
ZFINID: | ZDB-GENE-071227-2 |
Length: | 498 |
Species: | Danio rerio |
Alignment Length: | 178 |
Identity: | 62/178 - (34%) |
Similarity: | 89/178 - (50%) |
Gaps: | 23/178 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 53 PNKGLHILDRSEWLGEPPSGKYPHLKLPVSNIIIHHT--ATEGCEQEDVCIYRMKTIQAFHMKSF 115
|| |:.||:|......|...:|.|||..:.|||| .::.|...:.|...|:::|.:|.:|.
Zfish 328 PN----IITRSQWGAASYIGSPSYLSLPVRYLFIHHTYQPSKPCTTFEQCAAEMRSMQRYHQQSN 388
Fly 116 GWVDIGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQIEAAKRLMDE 180
||.||||:|:.|.||.:|.||||:..|.|..||.:|...:.|||.:.:..|.:..:..
Zfish 389 GWSDIGYSFVAGSDGNLYEGRGWNWVGAHTYGYNSIGYGVCFIGDYTSTLPASSAMNM------- 446
Fly 181 GVRLH---------RLQPDYHIYAHRQLSPTESPGQKLFELMQNWPRF 219
||.. ||...|.:|.|||.:.||.||..|:..:|.|.|:
Zfish 447 -VRYDFTYCATNGGRLSKSYSLYGHRQAAATECPGNTLYRQIQTWERY 493
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LF | NP_648299.3 |
PGRP |
57..199 |
CDD:128941 |
51/152 (34%) |
PGRP |
236..363 |
CDD:295442 |
|
pglyrp6 | NP_001038687.2 |
PGRP |
328..472 |
CDD:128941 |
52/155 (34%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170586830 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.850 |
|
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