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Protein Alignment PGRP-LF and pglyrp2
DIOPT Version :9
| Sequence 1: | NP_648299.3 |
Gene: | PGRP-LF / 39064 |
FlyBaseID: | FBgn0035977 |
Length: | 369 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001038631.1 |
Gene: | pglyrp2 / 568634 |
ZFINID: | ZDB-GENE-071227-1 |
Length: | 458 |
Species: | Danio rerio |
| Alignment Length: | 170 |
Identity: | 65/170 - (38%) |
| Similarity: | 87/170 - (51%) |
Gaps: | 5/170 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 59 ILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTA--TEGCEQEDVCIYRMKTIQAFHMKSFGWVDIG 121
|:.|..|...||......|..|:|.:.||||| ::.|.....|...|:.:|.||.|.:||.|||
Zfish 287 IIPRCIWGAAPPQVPLELLSPPMSFLYIHHTAIPSKPCLNLQTCSQNMRAMQRFHQKDWGWYDIG 351
Fly 122 YNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQIEAAK-RLMDEGVRLH 185
|:|:||.||.||.||||..||.|..|...:...:||||.:....|....:|..: .|:..||...
Zfish 352 YSFVVGSDGYIYEGRGWMSQGAHTKGRNNVGYGVAFIGDYSGRLPSTHDMELVRHHLVKCGVNNG 416
Fly 186 RLQPDYHIYAHRQLSPTES-PGQKLFELMQNWPRF-TQDP 223
.||.|:.|..|||:..|.| ||..|:..:..|..: .:||
Zfish 417 FLQEDFTILGHRQVVVTTSCPGNALYSEITTWMHYKDKDP 456
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| PGRP-LF | NP_648299.3 |
PGRP |
57..199 |
CDD:128941 |
56/142 (39%) |
| PGRP |
236..363 |
CDD:295442 |
|
| pglyrp2 | NP_001038631.1 |
PGRP |
285..430 |
CDD:128941 |
56/142 (39%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C170586820 |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.850 |
|
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