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Protein Alignment PGRP-LF and PGRP-SB1
DIOPT Version :9
Sequence 1: | NP_648299.3 |
Gene: | PGRP-LF / 39064 |
FlyBaseID: | FBgn0035977 |
Length: | 369 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_648917.1 |
Gene: | PGRP-SB1 / 39870 |
FlyBaseID: | FBgn0043578 |
Length: | 190 |
Species: | Drosophila melanogaster |
Alignment Length: | 189 |
Identity: | 61/189 - (32%) |
Similarity: | 96/189 - (50%) |
Gaps: | 6/189 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 VGLAAGYFMWMMSFSTHSPNKGLHILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTAT-EGCEQED 98
:...|...:..::.|.:: |.|..||.| |...:.....:...|..:||||:.. .||...:
Fly 7 ISFVAALVLCCLALSANA----LQIEPRSSW-GAVSARSPSRISGAVDYVIIHHSDNPNGCSTSE 66
Fly 99 VCIYRMKTIQAFHMKSFGWVDIGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVN 163
.|...:|.||:.|.....:.||||||:|.|||::|.|||:.:||.|...|...|:.|.|||.|..
Fly 67 QCKRMIKNIQSDHKGRRNFSDIGYNFIVAGDGKVYEGRGFGLQGSHSPNYNRKSIGIVFIGNFER 131
Fly 164 MEPPARQIEAAKRLMDEGVRLHRLQPDYHIYAHRQLSPTESPGQKLFELMQNWPRFTQD 222
..|.|:.::.||.|::...:...|:.:|.::.|||...|..||..|:..::.||.:.|:
Fly 132 SAPSAQMLQNAKDLIELAKQRGYLKDNYTLFGHRQTKATSCPGDALYNEIKTWPHWRQN 190
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LF | NP_648299.3 |
PGRP |
57..199 |
CDD:128941 |
51/142 (36%) |
PGRP |
236..363 |
CDD:295442 |
|
PGRP-SB1 | NP_648917.1 |
PGRP |
25..167 |
CDD:128941 |
51/142 (36%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45440271 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.950 |
|
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