Protein Alignment PGRP-LF and PGRP-SC1a

DIOPT Version :10

• Sequence 1: NP_648299.3
• Gene: PGRP-LF / 39064
• FlyBaseID: FBgn0035977
• Length: 369
• Species: Drosophila melanogaster
• Sequence 2: NP_610407.1
• Gene: PGRP-SC1a / 35859
• FlyBaseID: FBgn0043576
• Length: 185
• Species: Drosophila melanogaster
• Alignment Length: 199
• Identity: 68/199 - (34%)
• Similarity: 107/199 - (53%)
• Gaps: 26/199 - (13%)

  Fly    29 VILLMVVGLAAGYFMWMMSFSTHSPNKGLHILDRSEWLGEPPS-----GKYPHLKLPVSNIIIHH 88
            |.||:.|.:.:.|..           :|::::.::||.|....     |.|      :|..||||
  Fly     5 VALLLAVLVCSQYMA-----------QGVYVVSKAEWGGRGAKWTVGLGNY------LSYAIIHH 52

  Fly    89 TATEGCEQEDVCIYRMKTIQAFHMKSFGWVDIGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISV 153
            ||...||....|...::::|.:||.|.||.|||||||:||||.:|.||||:..|.|...:...|:
  Fly    53 TAGSYCETRAQCNAVLQSVQNYHMDSLGWPDIGYNFLIGGDGNVYEGRGWNNMGAHAAEWNPYSI 117

  Fly   154 SIAFIGTF--VNMEPPARQIEAAKRLMDEGVRLHRLQPDYHIYAHRQLSPTESPGQKLFELMQNW 216
            .|:|:|.:  ..:||  ..|.||::|:::.|...:|...|.:|.|||:|.||.||..::..::.|
  Fly   118 GISFLGNYNWDTLEP--NMISAAQQLLNDAVNRGQLSSGYILYGHRQVSATECPGTHIWNEIRGW 180

  Fly   217 PRFT 220
            ..::
  Fly   181 SHWS 184

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LF	NP_648299.3	PGRP	57..199	CDD:128941	55/148 (37%)
		PGRP	236..363	CDD:470657
PGRP-SC1a	NP_610407.1	PGRP	22..163	CDD:128941	55/148 (37%)