powered by:
Protein Alignment PGRP-LF and Pglyrp2
DIOPT Version :9
Sequence 1: | NP_648299.3 |
Gene: | PGRP-LF / 39064 |
FlyBaseID: | FBgn0035977 |
Length: | 369 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038935975.1 |
Gene: | Pglyrp2 / 299567 |
RGDID: | 1359183 |
Length: | 522 |
Species: | Rattus norvegicus |
Alignment Length: | 162 |
Identity: | 60/162 - (37%) |
Similarity: | 85/162 - (52%) |
Gaps: | 3/162 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 62 RSEWLGEPPSGKYPHLKLPVSNIIIHHTATEG--CEQEDVCIYRMKTIQAFHMKSFGWVDIGYNF 124
|..|...|..|....|:||:..:.:|||.... |.....|...|:::|.||....||.||||:|
Rat 357 RCRWGAAPYRGHPTPLRLPLGLLYVHHTYVPAPPCTTFQSCAADMRSMQRFHQNVRGWADIGYSF 421
Fly 125 LVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQIEAAKRLMDE-GVRLHRLQ 188
:||.||.:|.|||||..|.|..||.:....:||:|.:....|....:...:.::.. .:|...|:
Rat 422 VVGSDGYVYQGRGWHWVGAHTLGYNSRGFGVAFVGNYTGSLPSEAALNTVRDVLPSCAIRAGLLR 486
Fly 189 PDYHIYAHRQLSPTESPGQKLFELMQNWPRFT 220
|||.::.||||..|:.||..||.|::.||.||
Rat 487 PDYKLFGHRQLGKTDCPGNALFNLLRTWPHFT 518
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LF | NP_648299.3 |
PGRP |
57..199 |
CDD:128941 |
48/139 (35%) |
PGRP |
236..363 |
CDD:295442 |
|
Pglyrp2 | XP_038935975.1 |
PGRP |
352..497 |
CDD:128941 |
48/139 (35%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345851 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.850 |
|
Return to query results.
Submit another query.