DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGRP-LF and PGLYRP3

DIOPT Version :10

Sequence 1:NP_648299.3 Gene:PGRP-LF / 39064 FlyBaseID:FBgn0035977 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_011507420.1 Gene:PGLYRP3 / 114771 HGNCID:30014 Length:377 Species:Homo sapiens


Alignment Length:344 Identity:96/344 - (27%)
Similarity:151/344 - (43%) Gaps:57/344 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FMWMMSFSTHSPNKGLHILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTATEGCEQEDVCIYRMKT 106
            |:.:..|.....|....|:.|.|| |..|......|.|||:.||........|:|:.||...::.
Human    42 FVSISQFIHKGRNDTPTIVSRKEW-GARPLACRALLTLPVAYIITDQLPGMQCQQQSVCSQMLRG 105

  Fly   107 IQAFHMKSFGWVDIGYNFLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQI 171
            :|:..:.:.||.|:.||||||.||::|.|.||:|||.|..||..||:.|||.|..:...|....:
Human   106 LQSHSVYTIGWCDVAYNFLVGDDGRVYEGVGWNIQGLHTQGYNNISLGIAFFGNKIGSSPSPAAL 170

  Fly   172 EAAKRLMDEGVRLHRLQPDYHIYAHRQLSPTESPGQKLFELMQNWPRFTQDPTSLRLLSNETV-- 234
            .||:.|:...::...|.|.|       :.|.                         ||..||.  
Human   171 SAAEGLISYAIQKGHLSPRY-------IQPL-------------------------LLKEETCLD 203

  Fly   235 ------------KIVTRPYWLAQPPIVPLTPLKLPIESVRFVATNTPSCFTQAECTFRVRLLQNW 287
                        .|:.|..|.|:....|  .:.||.:.|..:.|...||....:|...||.:|::
Human   204 PQHPVMPRKVCPNIIKRSAWEARETHCP--KMNLPAKYVIIIHTAGTSCTVSTDCQTVVRNIQSF 266

  Fly   288 HIESNGYKDINYNFVAAGDENIYEARGWDHSCEPPKDADELV--VAFIG------PSSSNKKIAL 344
            |:::..:.||.|:|:...|..:||..||..........:::.  :||||      |:::..:.|.
Human   267 HMDTRNFCDIGYHFLVGQDGGVYEGVGWHIQGSHTYGFNDIALGIAFIGYFVEKPPNAAALEAAQ 331

  Fly   345 ELIKQGIKLGHISKNYSLI 363
            :||:..:..|:::.||.|:
Human   332 DLIQCAVVEGYLTPNYLLM 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LFNP_648299.3 PGRP 57..199 CDD:128941 51/141 (36%)
PGRP 236..363 CDD:470657 36/134 (27%)
PGLYRP3XP_011507420.1 PGRP 57..195 CDD:128941 52/170 (31%)
PGRP 215..355 CDD:128941 37/138 (27%)

Return to query results.
Submit another query.