DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LF and PGLYRP2

DIOPT Version :10

Sequence 1:NP_648299.3 Gene:PGRP-LF / 39064 FlyBaseID:FBgn0035977 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001350475.1 Gene:PGLYRP2 / 114770 HGNCID:30013 Length:634 Species:Homo sapiens


Alignment Length:205 Identity:72/205 - (35%)
Similarity:101/205 - (49%) Gaps:30/205 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RSEWLGEPPSGKYPHLKLPVSNIIIHHTATEG--CEQEDVCIYRMKTIQAFHMKSFGWVDIGYNF 124
            |..|...|..|:...|:||:..:.:|||....  |.....|...|:::|.:|..:.||.||||:|
Human   385 RCRWGAAPYRGRPKLLQLPLGFLYVHHTYVPAPPCTDFTRCAANMRSMQRYHQDTQGWGDIGYSF 449

  Fly   125 LVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQIEAAKRLMDE-----GVRL 184
            :||.||.:|.|||||..|.|..|:.:....:|.:|.:....|    .|||.|.:.:     .||.
Human   450 VVGSDGYVYEGRGWHWVGAHTLGHNSRGFGVAIVGNYTAALP----TEAALRTVRDTLPSCAVRA 510

  Fly   185 HRLQPDYHIYAHRQLSPTESPGQKLFELMQNWPRFTQDPTSLRLLSNETVKIVTRPYWLAQPPIV 249
            ..|:|||.:..||||..|:.||..||:|::.||.||  ..|||.|           ::.|:.|.|
Human   511 GLLRPDYALLGHRQL
VRTDCPGDALFDLLRTWPHFT--AVSLRSL-----------HYTARRPSV 562

  Fly   250 ------PLTP 253
                  ||.|
Human   563 YTSSTRPLPP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LFNP_648299.3 PGRP 57..199 CDD:128941 50/143 (35%)
PGRP 236..363 CDD:470657 6/24 (25%)
PGLYRP2NP_001350475.1 PGRP 380..525 CDD:128941 50/143 (35%)

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