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Protein Alignment PGRP-LC and pglyrp5
DIOPT Version :9
Sequence 1: | NP_001246693.1 |
Gene: | PGRP-LC / 39063 |
FlyBaseID: | FBgn0035976 |
Length: | 520 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001037786.1 |
Gene: | pglyrp5 / 553387 |
ZFINID: | ZDB-GENE-050419-71 |
Length: | 238 |
Species: | Danio rerio |
Alignment Length: | 170 |
Identity: | 53/170 - (31%) |
Similarity: | 77/170 - (45%) |
Gaps: | 16/170 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 320 TLNQSKIRDDDDYRQNIPINSTIDLDNIGGGLILRFVERQQWLAQPPQKEIPDLELPVGLVIALP 384
|.|:..:.|.|.:...:.||:.. |.|:.|.|..| :|:..:|.|...||...
Zfish 48 TGNEKFVADMDGHTNTVDINADT-------------VSRRGWDAVQP-REMTQMESPAHTVIVHH 98
Fly 385 TNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNFLIGGDGNVYVGRGWNKMGAHMNNINYDSQ 449
|....|:.....|..:..:|...::.....||.|||||.|||.||.||||..:|||....|: .
Zfish 99 TALRFCAHPRESVTELAHIQRMHMQERGFDDIGYNFLISGDGTVYEGRGWGIVGAHAKEHNF--Y 161
Fly 450 SLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKIAPSY 489
|:..|::|:.....||:..||....||..||..|.:.|::
Zfish 162 SVGIAFMGNLNADLPSSASLSALLRLLHIGVLHGHVRPNF 201
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LC | NP_001246693.1 |
PGRP |
356..490 |
CDD:128941 |
47/134 (35%) |
pglyrp5 | NP_001037786.1 |
PGRP |
68..209 |
CDD:128941 |
47/150 (31%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.780 |
|
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