Protein Alignment PGRP-LC and PGRP-LD

DIOPT Version :9

• Sequence 1: NP_001246693.1
• Gene: PGRP-LC / 39063
• FlyBaseID: FBgn0035976
• Length: 520
• Species: Drosophila melanogaster
• Sequence 2: NP_001137893.1
• Gene: PGRP-LD / 3771920
• FlyBaseID: FBgn0260458
• Length: 327
• Species: Drosophila melanogaster
• Alignment Length: 373
• Identity: 86/373 - (23%)
• Similarity: 132/373 - (35%)
• Gaps: 109/373 - (29%)

  Fly   173 NPLEAGIVAK------QILNGNLAVATPTSPAGGATQGIGSIALTNSTDVTFGDKHFYEGPVTIQ 231
            |.|.|.|:||      .:....:|..:| |||..:....||  |.:|.|:
  Fly    33 NHLVAFILAKLHNLLFALYFATIARRSP-SPAAVSQSSYGS--LGSSQDI--------------- 79

  Fly   232 QFLIDNRDKWKPGEGPAGGQDNP---AFNGGPSTNGSAPGSKHEDPAQTPPICPFLP----NTVG 289
            ...:|.       ||.| .:..|   |......|:.|...|.... :.||..|...|    :...
  Fly    80 HIRVDK-------EGVA-SESTPLLAAAQRSIKTSSSLTASVSAS-STTPSNCRRNPTLHEDCFN 135

  Fly   290 RKAVTVTVVFVTLTFLLGIVL--ATTTNLFGKTLNQSKIRDDDDYRQNIPINSTIDLDNIGGGLI 352
            .::|.:.|:..:...|...:|  .|.|..||             ||.:|          :|.|:
  Fly   136 WRSVGLLVMCASALALAAYLLWRQTQTPDFG-------------YRLSI----------VGHGI- 176

  Fly   353 LRFVERQQWLAQPPQKEIPDLELP----------VGLVIALPTNSENCSTQAICVLRVRLLQTYD 407
                    |         .|:||.          ||.||...|.|..|......||       :.
  Fly   177 --------W---------SDMELQGRGTLFDPIGVGTVIFTHTGSNECHDDCPDVL-------HK 217

  Fly   408 IESSQKCDIAYNFLIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVT 472
            :|.|...::.||||:.||..|:..:||:....:..::| ...||..|::|:|....|...||...
  Fly   218 LERSHVGELPYNFLVAGDCQVFEAQGWHYRSQYPRDLN-GIDSLVMAFVGNFSGRPPIDCQLMAA 281

  Fly   473 RLLLERGVKLGKIAPSYRFTASSKLMPSVTDFKADALYASFANWTHWS 520
            :.|:...:|...:.|.|:..    ::.|.|    |||.....:|.|::
  Fly   282 QALILESLKRRILQPIYQLF----VLGSYT----DALQRELRHWPHYA 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LC	NP_001246693.1	PGRP	356..490	CDD:128941	36/143 (25%)
PGRP-LD	NP_001137893.1	PGRP	169..306	CDD:128941	40/176 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11022
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010