Protein Alignment PGRP-LC and Pglyrp4

DIOPT Version :9

• Sequence 1: NP_001246693.1
• Gene: PGRP-LC / 39063
• FlyBaseID: FBgn0035976
• Length: 520
• Species: Drosophila melanogaster
• Sequence 2: XP_038958226.1
• Gene: Pglyrp4 / 310611
• RGDID: 1308520
• Length: 384
• Species: Rattus norvegicus
• Alignment Length: 164
• Identity: 54/164 - (32%)
• Similarity: 78/164 - (47%)
• Gaps: 6/164 - (3%)

  Fly   356 VERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNF 420
            |.|..|.|:  :.....:.||....|.|.|....||....|.|.::.||::.::....|||.|||
  Rat   225 VPRSAWGAR--ESHCFKMTLPAKYAIILHTAGRTCSQPDECRLLIQDLQSFFMDRLNACDIGYNF 287

  Fly   421 LIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKI 485
            |:|.||.||.|.|||..|:..:  .|:..:||.|::|.|....|:|..|...:.|::..|..|.:
  Rat   288 LVGQDGGVYEGVGWNNQGSKTD--GYNDIALSIAFMGIFTGSSPNAAALQAAQDLIQCAVVKGYL 350

  Fly   486 APSYRFTASSKLMPSVTDFKADALYASFANWTHW 519
            .|:|.....|.:  |.|.....|||.....|.|:
  Rat   351 TPNYLLMGHSDV--SNTLSPGQALYNIIKTWPHF 382

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LC	NP_001246693.1	PGRP	356..490	CDD:128941	45/133 (34%)
Pglyrp4	XP_038958226.1	PGRP	67..201	CDD:128941
		PGRP	222..362	CDD:128941	47/140 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1110472at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_126407
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820