Protein Alignment PGRP-LC and Pglyrp2

DIOPT Version :9

• Sequence 1: NP_001246693.1
• Gene: PGRP-LC / 39063
• FlyBaseID: FBgn0035976
• Length: 520
• Species: Drosophila melanogaster
• Sequence 2: XP_038935975.1
• Gene: Pglyrp2 / 299567
• RGDID: 1359183
• Length: 522
• Species: Rattus norvegicus
• Alignment Length: 515
• Identity: 106/515 - (20%)
• Similarity: 170/515 - (33%)
• Gaps: 176/515 - (34%)

  Fly   127 AEDYTVQKLGHQ----------VTYPPNSSHLRDLNQGLTVISRH-----------VAPGEAAV- 169
            |::|:.....||          .|.|...|...:|...::.:::|           :||..:.|
  Rat    59 AKNYSSHNSLHQHLLLKAPSQNTTEPDTHSLSPELQALISEVAQHDVRDGQEYGVVLAPDGSTVA 123

  Fly   170 --PPPNPLEAGIVAKQILN-----------GNL------AVATPTSPAGGATQGIGSIALTNSTD 215
              |....||||:..:.:.|           |.:      |....:||..|||       |.|...
  Rat   124 VKPLLVGLEAGLQGRSVANLSSDCLDTCDTGAIWPGLKDAFTNVSSPDAGAT-------LPNDKA 181

  Fly   216 VTFGDKHFYEGPVTIQQFL------------IDNRDKWKPGEGPAGGQDNPAFNGGPSTNGSAPG 268
            .|         |.|:.:.|            :.....|.|                       ||
  Rat   182 KT---------PTTVDRLLAVTLAGDLGLTFLHRSQTWSP-----------------------PG 214

  Fly   269 SKHE---DPAQTPPICPFLPNTVGRKAVTVTVVFVTLTFLLGIVLATTTNLFGKTLNQ------- 323
            ...|   |....|.:...|.:...|         :|:.||.|   |....|.|..|::
  Rat   215 LGIEGCWDQLSAPRVFTLLDHKASR---------LTMAFLNG---ALDGALLGAHLSRIPKPHPP 267

  Fly   324 ----------SKIRDDDDYRQNIPINSTIDL-------DNIGGGLIL------------------ 353
                      :.:..|..:|.|....:.:.|       ..:...|:|
  Rat   268 LSRLLREYYGAGVDGDPAFRSNFRRQNGVALTSAPTLAQQVWEALVLLQKLEPGHPRLQNMSQKQ 332

  Fly   354 ----------RFVE----------RQQWLAQPPQKEIPDLELPVGLVIALPT--NSENCSTQAIC 396
                      .|.|          |.:|.|.|.:.....|.||:||:....|  .:..|:|...|
  Rat   333 LAQVATFATKEFTEAFLGCPAIHPRCRWGAAPYRGHPTPLRLPLGLLYVHHTYVPAPPCTTFQSC 397

  Fly   397 VLRVRLLQTYDIESSQKCDIAYNFLIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKT 461
            ...:|.:|.:........||.|:|::|.||.||.||||:.:|||  .:.|:|:....|::|::..
  Rat   398 AADMRSMQRFHQNVRGWADIGYSFVVGSDGYVYQGRGWHWVGAH--TLGYNSRGFGVAFVGNYTG 460

  Fly   462 IQPSAKQLSVTR-LLLERGVKLGKIAPSYRFTASSKLMPSVTDFKADALYASFANWTHWS 520
            ..||...|:..| :|....::.|.:.|.|:.....:|  ..||...:||:.....|.|::
  Rat   461 SLPSEAALNTVRDVLPSCAIRAGLLRPDYKLFGHRQL--GKTDCPGNALFNLLRTWPHFT 518

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LC	NP_001246693.1	PGRP	356..490	CDD:128941	43/146 (29%)
Pglyrp2	XP_038935975.1	PGRP	352..497	CDD:128941	43/146 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1110472at2759
OrthoFinder	1	1.000	-	-		FOG0000842
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920