powered by:
Protein Alignment PGRP-LC and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_001246693.1 |
Gene: | PGRP-LC / 39063 |
FlyBaseID: | FBgn0035976 |
Length: | 520 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033428.1 |
Gene: | Pglyrp1 / 21946 |
MGIID: | 1345092 |
Length: | 182 |
Species: | Mus musculus |
Alignment Length: | 168 |
Identity: | 56/168 - (33%) |
Similarity: | 77/168 - (45%) |
Gaps: | 12/168 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 356 VERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNF 420
|.|.:|.|.|.:.. ..|..||..|:...|....|::...|..:.|.:|.|.......||:||||
Mouse 21 VPRSEWRALPSECS-SRLGHPVRYVVISHTAGSFCNSPDSCEQQARNVQHYHKNELGWCDVAYNF 84
Fly 421 LIGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKI 485
|||.||:||.|||||..|.|...| ::..|:...::|:|....|:.:.|.....|||.||..|.:
Mouse 85 LIGEDGHVYEGRGWNIKGDHTGPI-WNPMSIGITFMGNFMDRVPAKRALRAALNLLECGVSRGFL 148
Fly 486 APSYRF----TASSKLMPSVTDFKADALYASFANWTHW 519
..:|.. ...|.|.| .|.||....:|.|:
Mouse 149 RSNYEVKGHRDVQSTLSP------GDQLYQVIQSWEHY 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LC | NP_001246693.1 |
PGRP |
356..490 |
CDD:128941 |
47/133 (35%) |
Pglyrp1 | NP_033428.1 |
PGRP |
20..160 |
CDD:128941 |
48/140 (34%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
6 | 5.780 |
|
Return to query results.
Submit another query.