Protein Alignment PGRP-LC and mig-39

DIOPT Version :9

• Sequence 1: NP_001246693.1
• Gene: PGRP-LC / 39063
• FlyBaseID: FBgn0035976
• Length: 520
• Species: Drosophila melanogaster
• Sequence 2: NP_498871.3
• Gene: mig-39 / 185686
• WormBaseID: WBGene00018369
• Length: 943
• Species: Caenorhabditis elegans
• Alignment Length: 642
• Identity: 125/642 - (19%)
• Similarity: 200/642 - (31%)
• Gaps: 252/642 - (39%)

  Fly    70 KTESKRISVEHTVNITTENVGKTSSPAV-----------------SIRSTTISVVSIDDNAIDSS 117
            :|:..||.|:..|.|.|.:|....:|.|                 |.||:..||:|..::.|...
 Worm    13 ETKRFRIDVDTQVGIDTPSVSTNCAPPVAGEASQDGQSPAAPSSASYRSSNSSVISSSESPIKDE 77

  Fly   118 SID-SDSEAEAEDYTVQKLGHQVTYPPNSSHLRDLN-----------QGLTVISRHVAPGEAAVP 170
            .:| .|.:.:.||..:...|...:...||.....||           :|:...|..:.|..
 Worm    78 DVDVHDGQDDTEDIAMDVSGSTGSIVNNSEIFEMLNKTFGGVFNCDLEGIMRPSALMHPSS---- 138

  Fly   171 PPNPLE-AGIVAKQILNGNLAVA-TPT-------------SPAGGATQG-------IGSIALTNS 213
            ||.|:: |||      .|.|||| :|.             :||.....|       :....:.|.
 Worm   139 PPTPIQSAGI------PGALAVAQSPAAQLFSGDDWSWHRNPAASIRSGGTNKQTPVWKYFVYNK 197

  Fly   214 TD----VTFGD------------------KHFYE---------------------------GPVT 229
            |:    ...||                  ||..|                           .|:|
 Worm   198 TENLSRCIVGDCTYMLKGPHTSTLACHLKKHTREYSEFQKLKTEYSRTKLDQQPKIPDGAPHPLT 262

  Fly   230 IQQFLIDNRDKW-------------------------------------KPGEGPAGGQDNP-AF 256
            :|   ..|..:.                                     ||.:.|:..:.|. .|
 Worm   263 LQ---TQNTPRQTGSPASTCNTNSNTSSSVSSGSGIGSGSGSTMDLSMKKPKKEPSSAKLNEMLF 324

  Fly   257 NG----GPSTNGSAPGSKHEDPAQTPPICPFLPNTV---------------GRKAVTVTVVFVTL 302
            ||    ..::|||.|.:.|  ..|.|.|..|:.|.:               |....|.|.....|
 Worm   325 NGLRQATNNSNGSPPTTPH--APQLPNIPSFVTNMMLQMNPLHMMLAQSLPGATPPTPTSSNAGL 387

  Fly   303 TFL--LGIVLATTTNLFGKTLNQSKIRDDDDYRQNI-------PINSTIDLDNIGGGLILRFVER 358
            ..|  .|:.||..    |:.:...|.|:||..::.:       ...|.:|.:         .|:.
 Worm   388 NALQQAGLTLAAN----GQIIQSKKWRNDDKKQKELCTKFALALATSHVDFE---------VVQN 439

  Fly   359 QQWLAQPPQKEIPDLELPVGLVIALPTNSE-----NCSTQAICVLRVRLLQTY--DIESSQKCDI 416
            ..|      ||:.::..|   ..::||.|:     |.::.       :|:|:.  .:.:|:|.::
 Worm   440 PLW------KEVFEMAQP---KFSIPTESQYEHIVNSTSH-------KLIQSLKSQLSASKKLNL 488

  Fly   417 AYNF---------------LIGGDGNVYVGRGWNKMGAHMNNIN-YDSQSLS--FAYIGSFKTIQ 463
            ..:.               |.||.||.|..:   .:.....||| ..|:.|:  |..:.....|.
 Worm   489 LLDITKITADISRVTVSVALTGGAGNSYETQ---VILLAFRNINGNQSEDLTAVFEKVLQDYNIS 550

  Fly   464 PSAKQLSVTRLLLERGVKLGKIAPSYRFTASSKLMPSVTDFKADALYASFANWTHWS 520
            ||    |:.|::.....:|.:.|.          :|...|..:..|...|.:|...|
 Worm   551 PS----SINRVICSGLNELAEPAE----------LPKQMDSFSSRLANCFKSWLETS 593

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LC	NP_001246693.1	PGRP	356..490	CDD:128941	32/158 (20%)
mig-39	NP_498871.3	Dimer_Tnp_hAT	<866..>902	CDD:283379

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910