DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LA and Pglyrp2

DIOPT Version :9

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_006524773.1 Gene:Pglyrp2 / 57757 MGIID:1928099 Length:544 Species:Mus musculus


Alignment Length:382 Identity:92/382 - (24%)
Similarity:148/382 - (38%) Gaps:85/382 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EENNSPTTDNSLW--TLQGRQRASPAQRLHNLTSAGSSTSS--SGLPLPQNIFT--NPAIQPSSV 61
            ::..:|||.:.|.  ||.|....:...|....:..|..|..  ..|..|: :||  :|.....::
Mouse   187 DKAKTPTTVDRLLAITLAGDLGLTFLHRSQTWSPPGLGTEGCWDQLTAPR-VFTLLDPQASRLTM 250

  Fly    62 INLNHSTD-VVIG----PMTQYQGPVSIYYMDYMEAHAMQTAAGIN------SNNANGNGNANRS 115
            ..||.:.| .::|    .:.:...|:|....:|.       .||:|      ||....||.|..|
Mouse   251 AFLNGALDGALLGNHLSQIPRPHPPLSHLLREYY-------GAGVNGDPVFRSNFRRQNGAALTS 308

  Fly   116 RDKSPSRRVTRNTILLITLILLVLATGLIVLYVELNRPKPELPSNKAIYFGNNYDHQTFPNLGNG 180
               :|:                 ||..:....|.|.:.:||              |....|:...
Mouse   309 ---APT-----------------LAQQVWEALVLLQKLEPE--------------HLQLQNISQE 339

  Fly   181 HL--------------------VVDREQWGASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIY 225
            .|                    :..|.:|||:. ..|...||:.|:.::.:.|..|.:.||....
Mouse   340 QLAQVATLATKEFTEAFLGCPAIHPRCRWGAAP-YRGHPTPLRLPLGFLYVHHTYVPAPPCTTFQ 403

  Fly   226 KCSIKMRTIQDSAIAEKGLPDIQSNFYVSEEGNIYVGRGWDW--ANT--YANQTLAITFMGDYGR 286
            .|:..||::|......:...||..:|.|..:|.:|.||||.|  |:|  |.::...:.|:|:|..
Mouse   404 SCAADMRSMQRFHQDVRKWDDIGYSFVVGSDGYLYQGRGWHWVGAHTRGYNSRGFGVAFVGNYTG 468

  Fly   287 FKPGPKQLEGVQFLL-AHAVANRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
            ..|....|..|:..| :.|:....:..||||:...|..:|..||..::..:|.||||
Mouse   469 SLPNEAALNTVRDALPSCAIRAGLLRPDYKLLGHRQLVLTHCPGNALFNLLRTWPHF 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 43/165 (26%)
Pglyrp2XP_006524773.1 PGRP 360..505 CDD:128941 42/145 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1110472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11022
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.980

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