Protein Alignment PGRP-LA and PGRP-SC2

DIOPT Version :9

• Sequence 1: NP_996026.1
• Gene: PGRP-LA / 39062
• FlyBaseID: FBgn0035975
• Length: 368
• Species: Drosophila melanogaster
• Sequence 2: NP_610410.1
• Gene: PGRP-SC2 / 35862
• FlyBaseID: FBgn0043575
• Length: 184
• Species: Drosophila melanogaster
• Alignment Length: 171
• Identity: 47/171 - (27%)
• Similarity: 77/171 - (45%)
• Gaps: 16/171 - (9%)

  Fly   180 GHLVVDREQWG----ASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDSAIA 240
            |..::.:.:||    .||.|      |...:.|.:|.|.....  |.....|..:::.||...:.
  Fly    20 GVTIISKSEWGGRSATSKTS------LANYLSYAVIHHTAGNY--CSTKAACITQLQNIQAYHMD 76

  Fly   241 EKGLPDIQSNFYVSEEGNIYVGRGWD----WANTYANQTLAITFMGDYGRFKPGPKQLEGVQFLL 301
            ..|..||..||.:..:||:|.||||:    .|..:.::::.|:|:|:|........|:...:.||
  Fly    77 SLGWADIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTLTSAQITAAKGLL 141

  Fly   302 AHAVANRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
            :.||:...|...|.|....|...|..||..::.|||.|.::
  Fly   142 SDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNW 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
PGRP-LA	NP_996026.1	PGRP	181..322	CDD:128941	38/148 (26%)
PGRP-SC2	NP_610410.1	PGRP	21..162	CDD:128941	38/148 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5479
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1110472at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11022
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.920