DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LA and PGRP-LE

DIOPT Version :10

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_573078.1 Gene:PGRP-LE / 32534 FlyBaseID:FBgn0030695 Length:345 Species:Drosophila melanogaster


Alignment Length:315 Identity:85/315 - (26%)
Similarity:131/315 - (41%) Gaps:77/315 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 AIQPSSVINLNHSTDVVIGPMTQYQGPVSIYYMDYMEAHAMQTAAGINSNNANGNGNANRSRDKS 119
            :||....:|:::||:|.||.:|...|.:.|            .|.|:..|..: ..:.:..||.:
  Fly    87 SIQTLGNVNISNSTNVHIGNVTNINGNIQI------------IADGLTQNRRD-RRHVSPPRDNA 138

  Fly   120 P-------------SRRVTRNTILLITLILLVLATGLIVLYVELNRPKPELPSNKAIYFGNNYDH 171
            |             |....|:.:.                   :.|.|.::|...:         
  Fly   139 PKTPTHFEDDYQDESEERVRSDVF-------------------IRRQKFKIPKELS--------- 175

  Fly   172 QTFPNLGNGHLVVDREQWGASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQD 236
                      .::.|..|.|.|.... .:||:.|:.||:|.|...:|..     |.:|.:|.|:|
  Fly   176 ----------AIIPRSSWLAQKPMDE-PLPLQLPVKYVVILHTATESSE-----KRAINVRLIRD 224

  Fly   237 SA---IAEKGLPDIQSNFYVSEEGNIYVGRGWD--WANT--YANQTLAITFMGDYGRFKPGPKQL 294
            ..   |..:|..||..||.|..:||||.||||.  .|:|  |...:|.|:|:|.:.:..|....|
  Fly   225 MQCFHIESRGWNDIAYNFLVGCDGNIYEGRGWKTVGAHTLGYNRISLGISFIGCFMKELPTADAL 289

  Fly   295 EGVQFLLAHAVANRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHFYGCGMDE 349
            ...:.|||..|.:.:|..||:|:...|...|.|||..:|:||:.|||||....:|
  Fly   290 NMCRNLLARGVEDGHISTDYRLICHCQCNSTESPGRRLYEEIQTWPHFYNIEEEE 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 49/147 (33%)
PGRP-LENP_573078.1 PGRP 175..317 CDD:128941 49/166 (30%)

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