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Protein Alignment PGRP-LA and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_996026.1 |
Gene: | PGRP-LA / 39062 |
FlyBaseID: | FBgn0035975 |
Length: | 368 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 174 |
Identity: | 51/174 - (29%) |
Similarity: | 82/174 - (47%) |
Gaps: | 19/174 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 175 PNLGNGHLVVDREQWGASKNSH--GLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDS 237
|| :..|..|.| :.:| .:.:|.| :|:|.|...:| |:....|.:::|..|..
Mouse 197 PN------ITPRSAWEA-RETHCPQMNLPAK----FVIIIHTAGKS--CNESADCLVRVRDTQSF 248
Fly 238 AIAEKGLPDIQSNFYVSEEGNIYVGRGW--DWANTYANQTLA--ITFMGDYGRFKPGPKQLEGVQ 298
.|..:...||..:|.|.::|.:|.|.|| :.::||....:| |.|||::....|....|:..|
Mouse 249 HIDNQDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKAAQ 313
Fly 299 FLLAHAVANRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
.|:..|||...:..:|.|:..:......|||..:|..|:.||||
Mouse 314 SLIQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHF 357
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LA | NP_996026.1 |
PGRP |
181..322 |
CDD:128941 |
40/146 (27%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
42/152 (28%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR11022 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
4 | 3.870 |
|
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