DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LA and Pglyrp1

DIOPT Version :10

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_033428.1 Gene:Pglyrp1 / 21946 MGIID:1345092 Length:182 Species:Mus musculus


Alignment Length:165 Identity:46/165 - (27%)
Similarity:79/165 - (47%) Gaps:9/165 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VVDREQWGASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDSAIAEKGLPDI 247
            :|.|.:|.|..:.  .:..|..|:.||:|:|.....  |::...|..:.|.:|.....|.|..|:
Mouse    20 IVPRSEWRALPSE--CSSRLGHPVRYVVISHTAGSF--CNSPDSCEQQARNVQHYHKNELGWCDV 80

  Fly   248 QSNFYVSEEGNIYVGRGWDWANTYAN-----QTLAITFMGDYGRFKPGPKQLEGVQFLLAHAVAN 307
            ..||.:.|:|::|.||||:....:..     .::.|||||::....|..:.|.....||...|:.
Mouse    81 AYNFLIGEDGHVYEGRGWNIKGDHTGPIWNPMSIGITFMGNFMDRVPAKRALRAALNLLECGVSR 145

  Fly   308 RNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
            ..:..:|::......:.|.|||..:||.|::|.|:
Mouse   146 GFLRSNYEVKGHRDVQSTLSPGDQLYQVIQSWEHY 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 37/143 (26%)
Pglyrp1NP_033428.1 PGRP 20..160 CDD:128941 37/143 (26%)

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