DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGRP-LA and LOC1276947

DIOPT Version :10

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_316359.1 Gene:LOC1276947 / 1276947 VectorBaseID:AGAMI1_013240 Length:188 Species:Anopheles gambiae


Alignment Length:164 Identity:52/164 - (31%)
Similarity:78/164 - (47%) Gaps:8/164 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VVDREQWGASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDSAIAEKGLPDI 247
            :|.|.|||| :.::...:|: ||.|:|::.|  .....|.....|:.:||.||...:...|..||
Mosquito    25 IVTRAQWGA-RAANTAQLPI-RPAPWVVMHH--TAGAACTTDAACAQQMRNIQSFHMDGNGWADI 85

  Fly   248 QSNFYVSEEGNIYVGRGWD----WANTYANQTLAITFMGDYGRFKPGPKQLEGVQFLLAHAVANR 308
            ..||.|.|.|..|.||||.    .|..|.::::.:..:|.:....|........|.|::..|:..
Mosquito    86 GYNFLVGENGAAYEGRGWGRQGAHAPGYNDRSVGMGVIGTFTNGIPNAAARNAAQQLISCGVSLG 150

  Fly   309 NIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
            :|..:|.|:...|...|..||...:.||||||.|
Mosquito   151 HIASNYWLIGHRQAVATACPGNAFFNEIRNWPRF 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 41/142 (29%)
LOC1276947XP_316359.1 PGRP 23..163 CDD:128941 41/141 (29%)

Return to query results.
Submit another query.