DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGRP-LA and LOC1271702

DIOPT Version :10

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_310547.4 Gene:LOC1271702 / 1271702 VectorBaseID:AGAMI1_004268 Length:200 Species:Anopheles gambiae


Alignment Length:164 Identity:49/164 - (29%)
Similarity:80/164 - (48%) Gaps:12/164 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VVDREQWGASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDSAIAEKGLPDI 247
            :|.|..|||:| |..:|..|| |:..|::.|...:.  |..:..|...:..||.....:....||
Mosquito    39 IVKRAAWGAAK-SKNVTYQLK-PVANVIVHHTTGER--CATVATCKEMVANIQTYHQTDNRWSDI 99

  Fly   248 QSNFYVSEEGNIYVGRGWDWANT----YANQTLAITFMGDYGRFKPGPKQLEGVQFLLAHAVANR 308
            ..||.:|.: |:|.|.||.....    |.::::.:.|:|::.:.:|.|:.|..:..||...|...
Mosquito   100 GYNFLISGQ-NVYEGIGWHRMGAHLRGYNDKSIGVAFLGNFDQERPTPRSLNLLARLLQCGVELG 163

  Fly   309 NIDVDYKLVAQNQTKVTRSPGAYVY---QEIRNW 339
            .:..||:|....|.:.|.|||.|:|   ||:.:|
Mosquito   164 ELADDYRLYGARQLQSTNSPGRYLYAKLQELDHW 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 39/142 (27%)
LOC1271702XP_310547.4 PGRP 37..177 CDD:128941 39/142 (27%)

Return to query results.
Submit another query.