DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LA and mterf2

DIOPT Version :10

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_002942246.2 Gene:mterf2 / 100485703 XenbaseID:XB-GENE-970028 Length:396 Species:Xenopus tropicalis


Alignment Length:190 Identity:44/190 - (23%)
Similarity:71/190 - (37%) Gaps:36/190 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SNKAIYFGNNYDHQTFPN--LGNGHLVVDREQ-----WGASKNSHGLTIPLKRPIPYVLI-THIG 215
            |||.|........|.|.|  ..|..::.:.||     .|...|.....:.|....|::|. |.:.
 Frog   173 SNKIISRLLTSSPQIFCNSVASNKQIITELEQNYLCLGGKQTNFRTWLMKLLSQDPFILSKTSLS 237

  Fly   216 V-------QSLPCDN--IYKCSIKMRTI---QDSAIAEKGLPDIQSNFYVSEEGNIYVGRGWDWA 268
            |       |||...|  :.|...|::.:   .:....|.|:..:::.|...||...::.......
 Frog   238 VKRNLKFFQSLGFSNEDVLKLLSKLKGVIFDLNREHMEAGILFLKTIFECREEELKHLIMKCPGL 302

  Fly   269 NTYANQTL--AITFMGDYG----RFKPGPKQLE----GVQF------LLAHAVANRNIDV 312
            ..|:..||  .|..|.:.|    :.|..|..||    .:||      |..|.:.|:|:::
 Frog   303 LCYSVPTLENRIKCMLNEGISVSQIKDCPNVLELTPQIIQFRIQKIKLSGHDIKNKNLEI 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 36/166 (22%)
mterf2XP_002942246.2 mTERF <81..>192 CDD:460581 7/18 (39%)
mTERF <141..334 CDD:460581 36/160 (23%)

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