DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LA and pglyrp2

DIOPT Version :10

Sequence 1:NP_996026.1 Gene:PGRP-LA / 39062 FlyBaseID:FBgn0035975 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001106487.2 Gene:pglyrp2 / 100127677 XenbaseID:XB-GENE-5779913 Length:497 Species:Xenopus tropicalis


Alignment Length:166 Identity:56/166 - (33%)
Similarity:79/166 - (47%) Gaps:8/166 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 VVDREQWGASKNSHGLTIPLKRPIPYVLITHIGVQSLPCDNIYKCSIKMRTIQDSAIAEKGLPDI 247
            |:.|..||| |...|..|.|..|:..|.|.|....|.||.:..:|:..||::|.....::|..||
 Frog   331 VIPRCMWGA-KRYKGKPIFLGLPLSRVFIHHTYEPSQPCTSFSQCAANMRSMQRFHQQDRGWDDI 394

  Fly   248 QSNFYVSEEGNIYVGRGWDWANT----YANQTLAITFMGDYGRFKPGPKQLEGV--QFLLAHAVA 306
            ..:|.|...|.:|.||||:.|..    |.:....::|:|||....|....|..|  :||.. ||.
 Frog   395 GYSFVVGSNGYLYEGRGWNRAGAHTRGYNSVGYGVSFIGDYTSIVPKDSILALVKDRFLRC-AVR 458

  Fly   307 NRNIDVDYKLVAQNQTKVTRSPGAYVYQEIRNWPHF 342
            ...|..:|.:....|...|..||..:|:||::|.||
 Frog   459 LGYITPNYIIQGHRQVVSTSCPGDALYKEIQSWDHF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LANP_996026.1 PGRP 181..322 CDD:128941 46/144 (32%)
pglyrp2NP_001106487.2 PGRP 329..474 CDD:128941 46/144 (32%)

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