DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4477 and Prss34

DIOPT Version :10

Sequence 1:NP_648295.1 Gene:CG4477 / 39058 FlyBaseID:FBgn0035971 Length:315 Species:Drosophila melanogaster
Sequence 2:NP_001099242.1 Gene:Prss34 / 287140 RGDID:1306667 Length:316 Species:Rattus norvegicus


Alignment Length:246 Identity:58/246 - (23%)
Similarity:98/246 - (39%) Gaps:43/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VSLR--SRSAEKFFGDNHFCSGVILAPMFVMTSAHCLINKRRVLISSRVLLIVAGTLNRLKYIPN 117
            ||||  :....|:   .|.|.|.::.|.:|:|:|||:..|.......||      .:.:|:...|
  Rat    48 VSLRFYNMKLSKW---EHICGGSLIHPQWVLTAAHCVELKEMEASCFRV------QVGQLRLYEN 103

  Fly   118 RTFVTP---VTHIWLPDSFTMRNKQDFGLLKVKNPFPRNNEHISIARLPVHP-PLPGLKCK---- 174
            ...:..   :.|....:..:.....|..|||:.:....:..        ||| .||....:    
  Rat   104 DQLMKVAKIIRHPKFSEKLSAPGGADIALLKLDSTVVLSER--------VHPVSLPAASQRISSK 160

  Fly   175 ----VMGWGRMYKGGPL--ASYMLYIDVQVIDSEAC-AKWLRVPSVEHVCAVDSDD-----LTAQ 227
                |.|||.:....||  ..::..:.|.::.:..| .|:....|::....:..||     :..:
  Rat   161 KTWWVAGWGVIEGHRPLPPPCHLREVAVPIVGNSDCEQKYRTYSSLDRTTKIIKDDMLCAGMEGR 225

  Fly   228 QPCGGDWGAPML----HNGTVYGIVTILAGCGVSHLPSLYTNVHSNANWIH 274
            ..|..|.|.|::    .:....|:|:...|||:...|.:||.|.|..:|||
  Rat   226 DSCQADSGGPLVCRWNCSWVQVGVVSWGIGCGLPDFPGVYTRVMSYLSWIH 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4477NP_648295.1 Tryp_SPc 55..276 CDD:238113 58/246 (24%)
Prss34NP_001099242.1 Tryp_SPc 33..276 CDD:238113 56/244 (23%)

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