DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4483 and spe-10

DIOPT Version :10

Sequence 1:NP_648294.1 Gene:CG4483 / 39057 FlyBaseID:FBgn0035970 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001021339.1 Gene:spe-10 / 3565514 WormBaseID:WBGene00004964 Length:351 Species:Caenorhabditis elegans


Alignment Length:315 Identity:70/315 - (22%)
Similarity:124/315 - (39%) Gaps:87/315 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LLTLTLIVTWTVIHMN---SMWWAPGSSLESVLNYALIWIQTF-GTLYNFIRSLMVGPGFVPLKW 80
            ||.:.||:.|..::|.   ::.:...|::::.: |.::....| .::::..::|....|.||.::
 Worm    32 LLFIQLILLWWSLYMYVTVTIGYYVQSTIQATI-YLIVGSFLFVMSMWSLAKTLFTRVGRVPERY 95

  Fly    81 HP---------------------------QLTKDKMFLQ--------------------FCTRCN 98
            .|                           ||.:....|:                    :|..|.
 Worm    96 RPSKELEDRLKAVTPMEKNRYVVEKSTPEQLAQQNTILEEMCTYCKVVVAECDQVGRLKYCYECG 160

  Fly    99 GYKAPRSHHCRRCNRCVMKMDHHCPWINTCVGWSNQDSFVYFLLFFMSGSIHGGIIIVSAVIRGI 163
            ..|..|:.||..|.:|.:|.||||||||.||...|   :.||||:.    |:...::...::..:
 Worm   161 HIKPDRARHCSSCGKCCIKYDHHCPWINMCVTHVN---YKYFLLYI----IYTSFLVYWYLLTSL 218

  Fly   164 KKRWLIRYGLRHMATVHLTQTNLLACVFSLGVIMGTV-LASIKLLYMQMKSILKNQTEIENWIVK 227
            :  ..:||.:....|..|.:.......|.:|.:.|.. |..:.:.:.|:.|:  |:|.:|.  .|
 Worm   219 E--GAVRYFINQQWTDELGKFLFYLFSFIVGGVFGYYPLGELIIFHYQLISL--NETTVEQ--TK 277

  Fly   228 KAAFR-RNAYPRKGIKPFVYPYNLGWKTNMREVF----------FSTGDGISWPV 271
            .|..| .||          ..||:|...|.:.||          .||.||:.:.:
 Worm   278 PALLRFDNA----------ADYNMGKYNNFQSVFGWGLWLCPIDSSTQDGLHFDI 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4483NP_648294.1 DHHC 88..224 CDD:396215 39/156 (25%)
spe-10NP_001021339.1 DHHC 151..277 CDD:396215 38/138 (28%)

Return to query results.
Submit another query.