DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4483 and dhhc-3

DIOPT Version :9

Sequence 1:NP_648294.1 Gene:CG4483 / 39057 FlyBaseID:FBgn0035970 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_491702.1 Gene:dhhc-3 / 172257 WormBaseID:WBGene00018009 Length:260 Species:Caenorhabditis elegans


Alignment Length:260 Identity:69/260 - (26%)
Similarity:110/260 - (42%) Gaps:54/260 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 IVTWTVIHMNSMWWAPGSSLESVLNYALIW-IQTFGTLYNFI--------------RSLMVGPGF 75
            :|||.::....:      .:..|:.|:  | ...|.|::|||              :::...||.
 Worm     4 VVTWLLVFYGQV------CVFLVMLYS--WETYPFHTIFNFIVFESFSVLAVISHLKTMTTDPGA 60

  Fly    76 V-------PLKWHPQLTKDKMFLQFCTRCNGYKAPRSHHCRRCNRCVMKMDHHCPWINTCVGWSN 133
            |       ......||...:..:..|.:|...|..|:|||..|.||:.:|||||||:|.|||..|
 Worm    61 VAKGDCTDETIERMQLINGQQTIYKCQKCASIKPDRAHHCSVCERCIRRMDHHCPWVNNCVGEGN 125

  Fly   134 QDSFVYFLLFFMSGSIHGGIIIVSAVIRGIKKRWLIRYGLRHMAT----VHLTQTNLLACVFSLG 194
            |..||.|.::....|:|.....|...:..:...|.....|...||    :.|...::|..:|: .
 Worm   126 QKFFVLFTMYIALLSMHALYWGVWQFVLCVGAEWQQCSSLTPPATTLLLIFLLFESILFAIFT-S 189

  Fly   195 VIMGTVLASIKLLYMQMKSILKNQTEIENWIVKKAAF------RRNAYPRKGIK-PFVYPYNLGW 252
            |:.||          |:.||..::|.||:...:.|..      |.||:  |.:: .|..|:::.|
 Worm   190 VMFGT----------QISSICNDETTIESMRSRNANLDEDERSRNNAW--KNLQLVFGGPFSVRW 242

  Fly   253  252
             Worm   243  242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4483NP_648294.1 zf-DHHC 88..224 CDD:279823 45/139 (32%)
dhhc-3NP_491702.1 zf-DHHC 86..211 CDD:279823 45/135 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1491968at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.