DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4483 and si:ch211-223a10.1

DIOPT Version :9

Sequence 1:NP_648294.1 Gene:CG4483 / 39057 FlyBaseID:FBgn0035970 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_009305694.1 Gene:si:ch211-223a10.1 / 101884554 ZFINID:ZDB-GENE-090313-86 Length:544 Species:Danio rerio


Alignment Length:222 Identity:58/222 - (26%)
Similarity:92/222 - (41%) Gaps:60/222 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PITLLTLTL-IVTWTVIHM----NSMWWAPGSSLESVLNYALIWIQTFGTLYNFIRSLMVGPGFV 76
            |:.|.|||. ::..||..:    .|.|.|     .::|:.:|:.......|  |.:.|...||  
Zfish   305 PVYLGTLTAGLIHSTVCFLYKIIPSFWPA-----HTLLHLSLVHFCVLAGL--FWKVLKQSPG-- 360

  Fly    77 PLKWHPQLTKDKMFL-------------QFCTRCNGYKAPRSHHCRRCNRCVMKMDHHCPWINTC 128
            .||   ....|..|.             :||..|...:.....|||.|:.|:...||||.:||.|
Zfish   361 QLK---DADTDSRFSSIGDLMEAGQSPDRFCIYCELIQVENCKHCRLCDMCIKDYDHHCLFINQC 422

  Fly   129 VGWSNQDSFVYFLLFFMSGSIHGGIIIVSAV------IRGI----------KKRWLIRYGLRHMA 177
            ||..|..:|:.||:..:...:   |.|:||:      :.|:          ::.|::.       
Zfish   423 VGRENHRTFILFLMSMVMAHL---IFILSAIFYLYLKVSGLQLSDWGSVAGREAWVLL------- 477

  Fly   178 TVHLTQTNLLACVFSLGVIMGTVLASI 204
               ||..|||: :|.:|.::|..|.:|
Zfish   478 ---LTLLNLLS-LFWVGWLLGEQLDAI 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4483NP_648294.1 zf-DHHC 88..224 CDD:279823 38/146 (26%)
si:ch211-223a10.1XP_009305694.1 ANK repeat 7..36 CDD:293786
Ank_2 9..102 CDD:289560
ANK 39..159 CDD:238125
ANK repeat 39..69 CDD:293786
ANK repeat 71..102 CDD:293786
Ank_2 76..162 CDD:289560
ANK repeat 138..170 CDD:293786
Ank_4 139..192 CDD:290365
zf-DHHC 384..509 CDD:279823 37/131 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.