DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a17

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001243653.1 Gene:slc6a17 / 798635 ZFINID:ZDB-GENE-030131-8187 Length:730 Species:Danio rerio


Alignment Length:657 Identity:201/657 - (30%)
Similarity:328/657 - (49%) Gaps:129/657 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KLETSRCAGSGEALLKPSLLPMALESSELSPD-RKARDNWGSSLEFLMSCIALSVGLGNVWRFPF 79
            ::..:...||...:.||          ::||| ...|..|.|.|:::::.:..|||||||||||:
Zfish    37 QMSMNMTGGSAPPIGKP----------DISPDLEDGRPAWNSKLQYILAQVGFSVGLGNVWRFPY 91

  Fly    80 TALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDF-APLMRGVGYAQLLALGVL 143
            ...:|||||:|:||.::|.::|.|::::|:.:||...||.:.|::: .|.:.|:|.:.|:..|.:
Zfish    92 LCQKNGGGAYLVPYFILLILIGIPLFFLELAVGQRIRRGSIGVWNYVCPRLGGIGASSLMVCGFV 156

  Fly   144 ATYYASVMALTLRYFFDSFASELPWSFCREEWGDGCVSASGGQPL-QGQLSRNFSSSTQLYLQRI 207
            ..||..::..::.|||.||...||||.|.       :..:|.|.: :.:..:  ||:|..:..|.
Zfish   157 GLYYNVIIGWSIFYFFQSFQYPLPWSDCP-------IRKNGSQAIVEPECEK--SSATTYFWYRE 212

  Fly   208 VLNETDSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALT 272
            .||.|.::.:..|. :..:.|.|..:|:.|.|.:|:|::||||..|..:||||||:|..|||.|.
Zfish   213 TLNITSTIADSGGL-NWRMTLSLLAAWIIVCLAVIKGIQSSGKVMYFSSLFPYVVLFCFLVRGLF 276

  Fly   273 LPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTT 337
            |.||.||:.:..||:.|.:||||||..|.|||||:|.:.||.:|.:||||:..:|.:.||.:|:.
Zfish   277 LKGAVDGIAHMFTPKLEIMLEPQVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSV 341

  Fly   338 LDTFTSLLSGVIIFGILG------------------------------------NLAHESGTKDI 366
            ::..||:|:.:::|.:||                                    |.:|.: |.|.
Zfish   342 INFLTSILATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSHDLIPPHVNFSHLT-TSDY 405

  Fly   367 A------SVVK----------------------AGPGLAFISYPDAIAKFKMFPQVFSLLFFAML 403
            |      .:||                      .|.|||||::.:|:..|...| .:|::||.||
Zfish   406 AEMYGVIKIVKEDSFAQLGLEQCLLEDELNKAVQGTGLAFIAFTEAMTHFPASP-FWSVMFFFML 469

  Fly   404 FMLGVGSNVGMVSCIMTVLKDQFVNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTF 468
            ..||:||.:|.::.|.|.:.|.| .::...:.|...::.||.||:::...|.:.:|:.|.:....
Zfish   470 INLGLGSMIGTMTGITTPILDTF-KIRKEYLTVGCCIVAFLCGLLFVQRSGNYFVTMFDDYSAGL 533

  Fly   469 VSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTM--RP 531
            ...:..|.|.::|.|||||||..||.|.||..:..:.|...|..|:|:.:::::..|::.|  .|
Zfish   534 PLTIVVILENVSVAWIYGTKRFMQDLEDMLGFRPYSVYFYLWKYVSPVCLIILISASVVEMAISP 598

  Fly   532 LSYNG----------QEFPLVYRVVGWCVSGC--------------IIGQLFYWAGYANFKQPKG 572
            |.||.          |.:|      .|.:..|              .|.:.|.|.       |.|
Zfish   599 LGYNAWVQDLAMERFQSYP------PWAIVMCFALIIVAMLPLPLVFIARHFNWL-------PDG 650

  Fly   573 SLKSRIN 579
            |.|..::
Zfish   651 SNKLSVS 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 176/539 (33%)
slc6a17NP_001243653.1 SLC5-6-like_sbd 63..651 CDD:294310 191/613 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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