DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and zgc:158427

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017207457.1 Gene:zgc:158427 / 790932 ZFINID:ZDB-GENE-061215-110 Length:579 Species:Danio rerio


Alignment Length:557 Identity:200/557 - (35%)
Similarity:314/557 - (56%) Gaps:30/557 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |..||...|||::.....||||||||||:....||||.|||||||.:...|.|::.:|..:|||:
Zfish    11 RGFWGKKTEFLLAVAGNVVGLGNVWRFPYLCYRNGGGVFLIPYLVFVVTCGVPLFLLETAMGQFT 75

  Fly   116 SRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DG 178
            ..|.:..:. ..||.:|:|||..|.:.....|:..::|..|.|...||:|:|||:.|...|. |.
Zfish    76 HEGGITCWHRLCPLAQGIGYAGQLTVLYSCMYFTIILAWALFYLISSFSSQLPWASCDNIWNTDN 140

  Fly   179 CVSASGGQPLQGQLSRNFSSSTQL----------YLQRIVLNETDSLEEGIGYPSGSLALMLGIS 233
            ||:.:.|       :..|:.:||:          :.:|.||:.:..:|: ||..:..:.|.|...
Zfish   141 CVNLAAG-------NLTFNRTTQMLINSTSAATEFWERRVLSLSGGIED-IGKINWEILLCLIAM 197

  Fly   234 WLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWY 298
            |:.....|.:||||:||..|..|.||||::.:||:|.||||||..|::::|.|:..:|.:||||.
Zfish   198 WIICYFCIWKGVKSTGKVVYFTATFPYVMLIVLLIRGLTLPGALQGIVFYLYPEPARLADPQVWM 262

  Fly   299 NAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGT 363
            .|.||:|||.:|..||:|...|||::.:|.|||...:..|::.||.::|..:|.:||.:||..|.
Zfish   263 EAGTQIFFSYSVIGGVLISLGSYNQYNNNCYRDCFWLCLLNSGTSFVAGFAVFSVLGFMAHVQGV 327

  Fly   364 KDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVN 428
             .|..|.::|||||||:||.|:|... |||::::.||.|:.:||:.:....|.|::|.:.|.|..
Zfish   328 -PIEEVAESGPGLAFIAYPQAVAMMP-FPQLWAVCFFIMIILLGLDTQFVSVECVITSVMDLFPE 390

  Fly   429 V-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVGWIYGT 487
            |     :..::|:.|.:..|...||.:|.||.::..|.|.:......|: .::||.:|:|||:|.
Zfish   391 VLRRAGRRELLVLLLCLTCFFGQLIMVTEGGMYVFQLFDNYACNGACLLFLSVFESLAIGWIFGA 455

  Fly   488 KRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN-GQEFPLVYRVVGWCVS 551
            :::....|.|...:.:.::.:||..:||||.|...|||::...||::| ...:|....|:||.::
Zfish   456 EKMFDIIEDMTESRPNYWFMLCWKYLTPLVSLTSFVYSMVRYTPLTFNRWYIYPDWAYVLGWLLA 520

  Fly   552 GCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDW 588
            ...|..:..|| .......|||||.|..:...|.:::
Zfish   521 LSSILLVPAWA-LGQMCAGKGSLKQRWRHLSSPETNF 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 181/491 (37%)
zgc:158427XP_017207457.1 SLC6sbd-TauT-like 11..552 CDD:271387 199/551 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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