DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and Slc6a17

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:581 Identity:189/581 - (32%)
Similarity:308/581 - (53%) Gaps:91/581 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KPSLLPMALES------SELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            |.|:|.:|.|:      :|...|.:.|..|.|.|:::::.|..||||||:||||:...:|||||:
  Rat    34 KQSVLNVAGETGGKQKVAEEELDAEDRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAY 98

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDF-APLMRGVGYAQLLALGVLATYYASVMAL 153
            |:||||:|.::|.|::::|:.:||...||.:.|:.: .|.:.|:|::..:....:..||..::..
  Rat    99 LVPYLVLLIIIGIPLFFLELAVGQRIRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGW 163

  Fly   154 TLRYFFDSFASELPWSFC---REEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSL 215
            ::.|||.||...||||.|   |    :|.|:.     ::.:..:  ||:|..:..|..|:.::|:
  Rat   164 SVFYFFKSFQYPLPWSECPVIR----NGTVAV-----VEPECEK--SSATTYFWYREALDISNSI 217

  Fly   216 EEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGV 280
            .|..|. :..:.:.|.::|..|.:.:::|::||||..|..:||||||:...|||.|.|.||.||:
  Rat   218 SESGGL-NWKMTVCLLVAWSIVGMAVVKGIQSSGKVMYFSSLFPYVVLACFLVRGLLLRGAVDGI 281

  Fly   281 MYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLL 345
            ::..||:.:|:|:||||..|.|||||:|.:.||.:|.:||||:..:|.:.||.:|:.::.|||:|
  Rat   282 LHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIAFSSYNKQDNNCHFDAALVSFINFFTSVL 346

  Fly   346 SGVIIFGILG------------------------------------NLAHESGTKDIASVVKA-- 372
            :.:::|.:||                                    |.:|.: |||.:.:...  
  Rat   347 ATLVVFAVLGFKANIMNEKCVVENAEKILGYLNSNVLSRDLIPPHVNFSHLT-TKDYSEMYNVIM 410

  Fly   373 --------------------------GPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSN 411
                                      |.|||||::.:|:..|...| .:|::||.||..||:||.
  Rat   411 TVKEKQFSALGLDPCLLEDELDKSVQGTGLAFIAFTEAMTHFPASP-FWSVMFFLMLINLGLGSM 474

  Fly   412 VGMVSCIMTVLKDQFVNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIF 476
            :|.::.|.|.:.|.| .|...:..|...|..|.|||:::...|.:.:|:.|.:..|....|..|.
  Rat   475 IGTMAGITTPIIDTF-KVPKEMFTVGCCVFAFFVGLLFVQRSGNYFVTMFDDYSATLPLTVIVIL 538

  Fly   477 ELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSL--LTMRPLSYN 535
            |.|||.||||||:..|:...||..:...:|...|..|:||.|.|:...|:  |.:.|..|:
  Rat   539 ENIAVAWIYGTKKFMQELTEMLGFRPYRFYFYMWKFVSPLCMAVLTTASIIQLGVSPPGYS 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 177/541 (33%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 182/555 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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