DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and si:ch211-132b12.2

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001038688.1 Gene:si:ch211-132b12.2 / 571877 ZFINID:ZDB-GENE-050420-178 Length:582 Species:Danio rerio


Alignment Length:579 Identity:197/579 - (34%)
Similarity:320/579 - (55%) Gaps:39/579 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |.||||..||:::...:.:|||||||||:...:|||||||:||||.:...|.|::.:|..:||::
Zfish    11 RGNWGSKTEFILAVAGIVIGLGNVWRFPYLCYKNGGGAFLVPYLVFVVTCGVPLFLLETAMGQYT 75

  Fly   116 SRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DG 178
            ..|.:..:. ..||..|:|||..|.:.....||..::|..|.|...||:|:|||:.|...|. |.
Zfish    76 QEGGITCWHRLCPLAEGIGYAGQLIVLYSCMYYIIILAWALFYLAFSFSSQLPWASCDNIWNTDA 140

  Fly   179 CVS-ASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTLIII 242
            ||: |.....|...:..|.:||...:.|..||..:..:|: :|..:..:.|.|.:.|:.....:.
Zfish   141 CVNLAENKLNLSTPMLLNSTSSVTEFWQHRVLALSGGIEK-VGKINWEILLCLIVMWIICYFCVW 204

  Fly   243 RGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFS 307
            :||||:||..|..|.||||::.:||:|.||||||..||:::|.|:..:|.:||||..|..|:|||
Zfish   205 KGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADPQVWMEAGAQIFFS 269

  Fly   308 LAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKA 372
            .|:....:.:..|||::.:|.||.:..:..|::.||:::|..:|.:||.:|.:.|. .|..|.::
Zfish   270 YALGTASLTVLGSYNKYNYNCYRSSLWLCLLNSSTSVIAGFAVFSVLGFMAQKQGL-PIEEVAES 333

  Fly   373 GPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV-----KLW 432
            |||||||:||.|:|... |||:::..||.|:.:||:.:....:...||.:.|.|..|     :..
Zfish   334 GPGLAFIAYPQAVAMMP-FPQLWAACFFIMIILLGLDTQFVAMEVFMTSVIDLFPTVLRKAGRRE 397

  Fly   433 IIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVGWIYGTKRLCQDAEY 496
            |.::...:..|...|:.:|.||.::..|.|::..:...|: ..:||.:|:||::|.:::....|.
Zfish   398 IFLLLFCLFCFFGQLVMVTEGGMYVFQLFDYYACSGACLLFLCVFESLAMGWVFGAEKMFGIIED 462

  Fly   497 MLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN-GQEFPLVYRVVGW--------CVSG 552
            |.|.:.:.::.:||..:||:|.|...|.||:..:||::| ...:|....|:||        .|.|
Zfish   463 MTNSRPNYWFMLCWKYLTPIVSLASFVCSLVKYKPLTFNRWYVYPDWAYVLGWLLALSSILLVPG 527

  Fly   553 CIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPKKLMDYQMFLRNKDEENS 611
            ..:|::|  ||       |||:|.|.::...|  |..|       .:...::||..|.:
Zfish   528 WALGRMF--AG-------KGSIKQRWSHLCSP--DTNP-------HFACKIQNKRHEKT 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 170/482 (35%)
si:ch211-132b12.2NP_001038688.1 SLC6sbd-TauT-like 11..550 CDD:271387 191/550 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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