DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a1l

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021330952.1 Gene:slc6a1l / 568985 ZFINID:ZDB-GENE-041210-296 Length:578 Species:Danio rerio


Alignment Length:557 Identity:200/557 - (35%)
Similarity:320/557 - (57%) Gaps:31/557 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPI 104
            |.....||   |.:|....:||:||:..::|||||||||:...:||||||||||...|...|.|:
Zfish    19 EKENKIPD---RGSWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAGIPL 80

  Fly   105 YYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWS 169
            :.:|..|||::|.|.:.|:...|:|:|||.|.::....|..||..::|..|.|.|.|..:||||.
Zfish    81 FLLETALGQYTSVGGLGVWKLIPMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFSSLKAELPWQ 145

  Fly   170 FCREEWG-DGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEE--GIGYP-SGSLALML 230
            .|...|. |.|.|   ...|..  :.|.||:...:.:|.:...|:.|||  .:.:| .|:|||  
Zfish   146 TCDNPWNTDRCFS---NYSLLD--TTNLSSAVTEFWERNMHQLTNGLEEPGELRWPLVGTLAL-- 203

  Fly   231 GISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQ 295
              ||:.|...|.:||:.:||..|..|.:||.::|||..|.:|||||.|||::::||.:.|||:.:
Zfish   204 --SWILVYFSIWKGVEWTGKVVYFSATYPYFMLFILFFRGVTLPGAIDGVLFYITPNFNKLLKSE 266

  Fly   296 VWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHE 360
            ||.:|.||:|||..:..|.:|...|||.|.:|||||:.||..:::.||:.:|::||.|:|.:::.
Zfish   267 VWLDAATQIFFSYGLGLGSLIALGSYNSFNNNVYRDSVIVCCINSCTSMFAGIVIFSIVGFMSYI 331

  Fly   361 SGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQ 425
            : .:.|..:..:||||||::||.|:.:..| ..::::|||:||.|||:.|....|...:|.|.|:
Zfish   332 T-KRPIEELAASGPGLAFLAYPQAVTQLPM-SSLWAILFFSMLMMLGLDSQFCTVEGFITALMDE 394

  Fly   426 FVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAI-FELIAVGWI 484
            :..|     |::|::|.|  :.|::|...||.||.::..|.|::..:.:.|:..: ||.|::.|.
Zfish   395 YPTVLRKRKKIFILIVCL--VSFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETISIAWF 457

  Fly   485 YGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVYRVVGWC 549
            ||.::..::.|.|:..:...:::.||...||.:.|.:..:|.:.|.||:.....:|...:.|||.
Zfish   458 YGAEKFYKNIEEMIGYRPCGFWKQCWIYFTPTICLGVFTFSAIEMTPLTLGKYVYPAWGQGVGWL 522

  Fly   550 VSGCIIGQLFYWAGYA--NFKQPKGSLKSRINNSIKP 584
            :|   :..:....||.  .|...||:::.|.:...||
Zfish   523 MS---LSSMVLIPGYIIYMFFSTKGNIRQRWHKMTKP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 179/483 (37%)
slc6a1lXP_021330952.1 SLC5-6-like_sbd 15..558 CDD:320982 200/557 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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