DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a16b

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001103944.1 Gene:slc6a16b / 567809 ZFINID:ZDB-GENE-070424-95 Length:676 Species:Danio rerio


Alignment Length:557 Identity:178/557 - (31%)
Similarity:284/557 - (50%) Gaps:90/557 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 PDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEML 110
            |...|||.|.|.:|:.::.:..|||||||||||:...:||||||::.|:|::.:||.|::::|:.
Zfish    28 PLETARDGWDSKVEYFLAQVGFSVGLGNVWRFPYLCHQNGGGAFILLYVVLMALVGVPLFFLELA 92

  Fly   111 LGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREE 174
            .||...:|.:.|: ..:|.:.|:||:..:....:|.||..::..::.|..:||...|||..|..|
Zfish    93 AGQSIRQGSIGVWRHISPKLVGIGYSSCVVCFFVALYYNVIIGWSIFYLGNSFQYPLPWEKCPTE 157

  Fly   175 WGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLG----ISWL 235
             |:..|.....           ||.|..:..|..|:.|||::|     :|....:|.    .:|:
Zfish   158 -GNSTVKECAA-----------SSPTAYFWYRKALDITDSIDE-----TGEFNFILTGCLLAAWV 205

  Fly   236 TVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNA 300
            .|.|.:.:|:|||||..|..::|||||:...|:|.:||.||.:|:.:...|:.|...:.|||..|
Zfish   206 IVCLAMYKGIKSSGKVMYFSSVFPYVVLLCFLIRGVTLDGASEGIKFMFYPRLEIWADVQVWRQA 270

  Fly   301 VTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILG----NLAHES 361
            .|||||:|.:.||.:|.|||||...:|.:|||..|:.::..||:|:.:::|.:||    .:|.|.
Zfish   271 ATQVFFALGLGFGSVIAYSSYNPRNNNCHRDAFTVSGVNFMTSVLATLVVFAVLGFRAKTIAAEC 335

  Fly   362 GTKDIASVVK---AGP------------------------------------------------- 374
            ..:::.:::|   :.|                                                 
Zfish   336 VKRNLKALLKVTSSAPLPVLSINASDVESISLDEYANWYSTQGMELSISDYNITACSLEDELRQG 400

  Fly   375 ----GLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFV---NVKLW 432
                |||||::.:|:..|...| .:|.|||.||..||:.:..|.::.|:|.|.|.|.   |.|| 
Zfish   401 VEETGLAFIAFTEAMTLFPGSP-FWSALFFLMLLNLGLSTMFGTMAGILTPLTDTFKTLRNHKL- 463

  Fly   433 IIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYM 497
            |..:....:||::||::....|.:.:|:.|.:..|...::..||:.|:|.|:||..|..:|.:.|
Zfish   464 IFTICSCTVGFVIGLVFTQRCGNYFVTMFDDYSATLPLIIVVIFQTISVSWVYGADRFLEDLKQM 528

  Fly   498 LNIKTSNYYRICWSIVTPLVMLVILVYSLLTM---RP 531
            ||......|:..|..|.|:.||.:|..|||.|   ||
Zfish   529 LNRPVPVIYKYLWKFVCPIAMLGLLGASLLKMILKRP 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 169/541 (31%)
slc6a16bNP_001103944.1 SLC6sbd-B0AT-like 33..607 CDD:271364 176/552 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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