DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and si:ch211-132b12.6

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001038523.1 Gene:si:ch211-132b12.6 / 564583 ZFINID:ZDB-GENE-050420-179 Length:577 Species:Danio rerio


Alignment Length:570 Identity:209/570 - (36%)
Similarity:323/570 - (56%) Gaps:48/570 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |..||...|||::.....||||||||||:....||||.|||||||.:...|.|::.:|..:|||:
Zfish    11 RGFWGKKAEFLLAVAGNVVGLGNVWRFPYLCYRNGGGVFLIPYLVFVVTCGLPLFLLETAMGQFT 75

  Fly   116 SRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DG 178
            ..|.:..:. ..||.:|||||..|.:.....||..::|..|.|...||:|:|||..|...|. |.
Zfish    76 HEGGITCWHRLCPLAQGVGYAGQLTVLYSCMYYTIILAWALFYLVSSFSSQLPWVSCNNIWNTDN 140

  Fly   179 CVSASGGQPL--QGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTLII 241
            ||:.:.|...  :..|:.:.|::|:.: :|.||:.:..:|: ||..:..:.|.|...|:.....|
Zfish   141 CVNLAAGNLTFNRTTLANSTSAATEFW-ERRVLSLSGGIED-IGKINWEILLCLIAMWIICYFCI 203

  Fly   242 IRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFF 306
            .:||||:||..|..|.||||::.:||:|.||||||..||:::|.|:..:|.:||||..|.|||||
Zfish   204 WKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADPQVWMEAGTQVFF 268

  Fly   307 SLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVK 371
            |.:||.|::|...|||::.:|.|||:..:..|::.||.::|..:|.:||.:||..|. .:..|.:
Zfish   269 SYSVCSGILISLGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFAVFSVLGFMAHVQGV-PVEEVAE 332

  Fly   372 AGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV------- 429
            :|||||||:||.|:|... |||::::.||.|:.:||:.|....:.|::|.:.|.|..|       
Zfish   333 SGPGLAFIAYPQAMAMMP-FPQLWAVCFFIMIILLGLDSQFVGIECVITSVMDLFPEVLRRAGRR 396

  Fly   430 KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVGWIYGTKRLCQD 493
            :|:::::.|:.  |...||.:|.||.::..|.|.:......|: .::||.:|:||::|.:::...
Zfish   397 ELFVLLLCLTC--FFGQLIMVTEGGMYVFQLFDNYACNGACLLFLSVFESLAIGWLFGAEKMFDI 459

  Fly   494 AEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN-GQEFPLVYRVVGW--------C 549
            .|.|...:.:.::.:||..:||||.|:..|||::...||::| ...:|.....:||        .
Zfish   460 IEDMTESRPNYWFMLCWKYLTPLVSLMSFVYSMVRYTPLTFNRWYVYPDWAYALGWLLALSSILL 524

  Fly   550 VSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGP--SDPKKLM 597
            |.|..:||:  |||       ||:||.|          ||.  |...|||
Zfish   525 VPGWALGQM--WAG-------KGTLKQR----------WGHLCSPETKLM 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 183/485 (38%)
si:ch211-132b12.6NP_001038523.1 SLC6sbd-TauT-like 11..550 CDD:271387 205/563 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.