DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and si:ch211-132b12.6

DIOPT Version :10

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001038523.1 Gene:si:ch211-132b12.6 / 564583 ZFINID:ZDB-GENE-050420-179 Length:577 Species:Danio rerio


Alignment Length:570 Identity:209/570 - (36%)
Similarity:323/570 - (56%) Gaps:48/570 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |..||...|||::.....||||||||||:....||||.|||||||.:...|.|::.:|..:|||:
Zfish    11 RGFWGKKAEFLLAVAGNVVGLGNVWRFPYLCYRNGGGVFLIPYLVFVVTCGLPLFLLETAMGQFT 75

  Fly   116 SRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DG 178
            ..|.:..:. ..||.:|||||..|.:.....||..::|..|.|...||:|:|||..|...|. |.
Zfish    76 HEGGITCWHRLCPLAQGVGYAGQLTVLYSCMYYTIILAWALFYLVSSFSSQLPWVSCNNIWNTDN 140

  Fly   179 CVSASGGQPL--QGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTLII 241
            ||:.:.|...  :..|:.:.|::|:.: :|.||:.:..:|: ||..:..:.|.|...|:.....|
Zfish   141 CVNLAAGNLTFNRTTLANSTSAATEFW-ERRVLSLSGGIED-IGKINWEILLCLIAMWIICYFCI 203

  Fly   242 IRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFF 306
            .:||||:||..|..|.||||::.:||:|.||||||..||:::|.|:..:|.:||||..|.|||||
Zfish   204 WKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQGVVFYLYPEPARLADPQVWMEAGTQVFF 268

  Fly   307 SLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVK 371
            |.:||.|::|...|||::.:|.|||:..:..|::.||.::|..:|.:||.:||..|. .:..|.:
Zfish   269 SYSVCSGILISLGSYNQYSNNCYRDSFWLCLLNSGTSFVAGFAVFSVLGFMAHVQGV-PVEEVAE 332

  Fly   372 AGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNV------- 429
            :|||||||:||.|:|... |||::::.||.|:.:||:.|....:.|::|.:.|.|..|       
Zfish   333 SGPGLAFIAYPQAMAMMP-FPQLWAVCFFIMIILLGLDSQFVGIECVITSVMDLFPEVLRRAGRR 396

  Fly   430 KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVGWIYGTKRLCQD 493
            :|:::::.|:.  |...||.:|.||.::..|.|.:......|: .::||.:|:||::|.:::...
Zfish   397 ELFVLLLCLTC--FFGQLIMVTEGGMYVFQLFDNYACNGACLLFLSVFESLAIGWLFGAEKMFDI 459

  Fly   494 AEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN-GQEFPLVYRVVGW--------C 549
            .|.|...:.:.::.:||..:||||.|:..|||::...||::| ...:|.....:||        .
Zfish   460 IEDMTESRPNYWFMLCWKYLTPLVSLMSFVYSMVRYTPLTFNRWYVYPDWAYALGWLLALSSILL 524

  Fly   550 VSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGP--SDPKKLM 597
            |.|..:||:  |||       ||:||.|          ||.  |...|||
Zfish   525 VPGWALGQM--WAG-------KGTLKQR----------WGHLCSPETKLM 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 183/485 (38%)
si:ch211-132b12.6NP_001038523.1 SLC6sbd-TauT-like 11..550 CDD:271387 205/563 (36%)

Return to query results.
Submit another query.