DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a7

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_005161359.1 Gene:slc6a7 / 562050 ZFINID:ZDB-GENE-070112-1492 Length:652 Species:Danio rerio


Alignment Length:617 Identity:220/617 - (35%)
Similarity:335/617 - (54%) Gaps:68/617 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LPKLETSRCAGSGEALLKPSL-----------LPMALESSELS-----PDRKARDNWGSSLEFLM 62
            :|..|.....|:| .:..||.           .|:|.:|...|     |.:..||.||...|||:
Zfish    19 MPTEEARTAPGNG-VITTPSTENPAHQNGAVSSPVASQSQPPSSAASPPAQPPRDQWGGKYEFLL 82

  Fly    63 SCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAP 127
            |||...||||||||||:....||||.|||||.::||..|.|::.||:.|||:.:.|.:.|:...|
Zfish    83 SCIGYCVGLGNVWRFPYLCYRNGGGVFLIPYFIMLFFTGMPLFLMELSLGQYGAAGPITVWKCCP 147

  Fly   128 LMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGDGCVSASGGQPLQG-Q 191
            |::|:|...|....::..||..::|.|..|...||.|.||||         |      ..||. .
Zfish   148 LLKGIGIGMLCVSTLVCLYYNVIIAWTFYYLGSSFQSPLPWS---------C------DALQNIA 197

  Fly   192 LSRNFSSSTQ-----LYLQRI--VLNETDSLEEG-IGYPSGSLALMLGISWLTVTLIIIRGVKSS 248
            |..|.::|||     .:.:::  |::.|...:.| :.:|   |||.|..:|:.:.|.:::|:.||
Zfish   198 LCANKTNSTQSPSEVFWNEKVLGVVHSTGLSDPGPVRWP---LALCLLAAWIIIFLCMLKGIHSS 259

  Fly   249 GKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFG 313
            ||..||.|.|||.|:.:|::|..||.|:.|||.::|||:|::|.:.|||.:|.:|:|:||.:..|
Zfish   260 GKVVYVTATFPYFVLLVLIIRGATLEGSLDGVAFYLTPKWDQLADAQVWNDAASQIFYSLGIGVG 324

  Fly   314 VIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAF 378
            .::..:|||:|.:||.||..|:|..:..||..:|..||.|||::|.:.|. .:..|..:||||||
Zfish   325 GLLSMASYNKFDNNVIRDTIIITIGNCSTSFFAGFAIFSILGHMAFKKGV-PVDKVADSGPGLAF 388

  Fly   379 ISYPDAIAKFKMFP-QVF-SLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVK-------LWII 434
            ::||:|:|   :.| .|| |:|||.|||||||.:..|.:..|.|.:.|:|..::       |::.
Zfish   389 VAYPEALA---LLPGSVFWSILFFLMLFMLGVDTLFGNMEGICTAVLDEFPQLRSNLKHKTLFLA 450

  Fly   435 VVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYML- 498
            |:..|.  :|:||:.||.||.:..||:|....:|..::..:|..|.:.:.||..:.|||...|: 
Zfish   451 VLCFSF--YLMGLLLITDGGIYWFTLIDSFSTSFGLIIITLFMCIGISFFYGVNQFCQDIVDMIC 513

  Fly   499 -----NIKTSNYYRICWSIVTPLVMLVILVYSLLTM--RPLSYNGQEFPLVYRVVGWCVSGCIIG 556
                 ..|...|::.||.:.||.::..||.|..:.|  ..|.|....:|:..:.:|.|:......
Zfish   514 RCPPWCTKMLLYFKACWVVFTPFLLTFILTYIFIEMYRTSLRYGSYVYPIWGKALGVCMGALCCL 578

  Fly   557 QLFYWAGYANFKQPKGSLKSRINNSIKPHSDW 588
            |:..||..|..|: .|:||.|...||:|.:.|
Zfish   579 QILIWAIVAISKE-SGTLKDRFKKSIRPLNSW 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 189/497 (38%)
slc6a7XP_005161359.1 SLC5-6-like_sbd 71..610 CDD:294310 209/564 (37%)
PotE <235..564 CDD:223605 126/337 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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