DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and si:ch211-225b11.1

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001103931.1 Gene:si:ch211-225b11.1 / 561694 ZFINID:ZDB-GENE-060531-39 Length:609 Species:Danio rerio


Alignment Length:556 Identity:214/556 - (38%)
Similarity:313/556 - (56%) Gaps:38/556 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |:.||..|||:::.|..:||||||||||:....:|||||||||:::||:.|.|:.:||..:||::
Zfish    54 RETWGRRLEFVLATIGYAVGLGNVWRFPYLCYRSGGGAFLIPYMIMLFLCGIPLLFMEFTVGQYT 118

  Fly   116 SRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGDGC 179
            ..|.|... ...||.:|||.|.::...||.|||..:|...|.|...||:..|||..|...| :..
Zfish   119 RLGPVHALAQICPLFKGVGLATVVISYVLCTYYNVLMTWALYYLLHSFSPSLPWQSCNNTW-NTV 182

  Fly   180 VSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLTVTLIIIRG 244
            .:.|.|.|  |. :.:..|::|.:....||..|..:|.. |.....|..:|.::|..|...|.:|
Zfish   183 ANCSTGFP--GN-ATHLQSASQQFFDHKVLEMTSGIERA-GGVRWELFGLLVLAWGIVYFCIFKG 243

  Fly   245 VKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLA 309
            |||:||..|..|.|||.::|.|||..:.||||.:|:::||.|.|.||||.|||.||..|:|.|:.
Zfish   244 VKSTGKVVYFTATFPYFILFALLVNNVQLPGAKNGILFFLMPNWSKLLEVQVWVNAAAQIFNSIG 308

  Fly   310 VCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLA--HESGTKDIASVVKA 372
            :.||.:|..:|||::.:|:.||..||:..::.||:::|.:||..:|.:|  |.....|||:   .
Zfish   309 ISFGSMISMASYNKYNNNILRDTFIVSLANSATSIVAGFVIFSAIGYMAHIHNLPVDDIAT---D 370

  Fly   373 GPGLAFISYPDAIAKFKMFP--QVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQF------VNV 429
            ||||.|:.||:.   |...|  |:::.|||.||..||:.|...||...:|.:.|.|      |..
Zfish   371 GPGLVFVVYPEV---FSTMPVSQLWAPLFFIMLLCLGLDSQFAMVEVAVTFIMDGFGRKALKVFK 432

  Fly   430 KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV-SAIFELIAVGWIYGTKRLCQD 493
            :..:||:::...|||:|:.:||.||.::..||| |....|||: .|.||::||..|:|.|||...
Zfish   433 RKELIVLAVCSFGFLLGIPHITRGGIYVFQLMD-HYTAVVSLMFLAFFEVLAVTLIFGVKRLSVM 496

  Fly   494 AEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSY-NGQEFPLVYRVVGWCVSGCII-- 555
            .|.||..|.:.::||||..::|:::|.||:.|::...|..| ....:||...::||.:|...|  
Zfish   497 VENMLGKKPNLFFRICWQYLSPMLVLGILISSIVQYTPARYGKSYTYPLWAELLGWFISLVSIIW 561

  Fly   556 ---GQLF-YWAGYANFKQPKGSLKSRINNSIKPHSD 587
               |.|. .|.       .:|||..|:..||.|..|
Zfish   562 IPLGALHELWT-------TEGSLLQRLKKSITPTVD 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 193/485 (40%)
si:ch211-225b11.1NP_001103931.1 SLC5-6-like_sbd 54..587 CDD:294310 212/551 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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