DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and slc6a22.2

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_005166102.1 Gene:slc6a22.2 / 561024 ZFINID:ZDB-GENE-030616-628 Length:608 Species:Danio rerio


Alignment Length:615 Identity:208/615 - (33%)
Similarity:331/615 - (53%) Gaps:45/615 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SGEALLKPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            |....:|.:||..||..:.  |...||:.|.:.||||::.....:|||||||||:...:||||||
Zfish     4 SSRPAVKLNLLNGALVKAR--PKPPAREQWANKLEFLLAVAGHIIGLGNVWRFPYLCYKNGGGAF 66

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMAL 153
            .:||::.||..|.|::::|..||||:|:|.:..: ...||..|:|:...:.:.....||..::|.
Zfish    67 FVPYVLFLFTCGIPLFFLETSLGQFTSQGGITCWRKICPLFEGLGFGSQVVVLYTGVYYIIILAW 131

  Fly   154 TLRYFFDSFASELPWSFCREEWG-DGCVSASGGQPLQGQLSRNFSSSTQL-YLQRIVLNETDSLE 216
            ...|.|.||.|||||:.|...|. ..|:..|.....  :.|.|.::|..: :.:|.:|..:..:|
Zfish   132 AFLYLFSSFTSELPWASCNNYWNTPSCMEFSESNIT--EYSPNKTTSPVIEFWERRILGLSGGIE 194

  Fly   217 EGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVM 281
            : ||.....|||.|.::|:.....:.:||||:||..|..|.|||:::.:||||.||||||.:|:.
Zfish   195 Q-IGNVRWDLALCLLLAWIICYFCVWKGVKSTGKVVYFTATFPYLMLIVLLVRGLTLPGAINGIT 258

  Fly   282 YFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLS 346
            ::|.|...:|.:||||.:|.:|:|:|..||.||:....|||::.:|.|||...:..|::.||.::
Zfish   259 FYLYPDPSRLKDPQVWMDAGSQIFYSYGVCTGVLTALGSYNKYDNNCYRDCVYLCLLNSLTSFVA 323

  Fly   347 GVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSN 411
            |..||.:||.:|.|.|. ||:.|.::|||||||:||.|:|...: ||::::.||.|:..||:.|.
Zfish   324 GFAIFSVLGFMADEQGV-DISLVAESGPGLAFIAYPRAVALMPL-PQLWAIFFFIMIIFLGLDSE 386

  Fly   412 VGMVSCIMTVLKDQF-----VNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSL 471
            ......::|.:.|.:     |..:...:::.:....|.|||:.:|.||.::..|.|::..:.::|
Zfish   387 FVYQEALVTSISDMYPSFFQVGHRRKFLLLFICSASFFVGLLMVTEGGLYVFQLFDYYACSGMTL 451

  Fly   472 VS-AIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYN 535
            :: ||.:.|.|||:||..|.....|.|:..:...:.:.||..:||.:.....::||:...||.:|
Zfish   452 LTFAILQSICVGWVYGADRHYDCVEDMIGYRPWPFMKCCWKYLTPAICTGTFIFSLVQYTPLKFN 516

  Fly   536 GQ-EFPLVYRVVGWCVSGCIIGQLF---------YWAGYANFKQPKGSLKSRINNSIKPHSDW-G 589
            .: |:|       |.  |..||..|         .|..|.....| ||::.|:.....|..|. .
Zfish   517 NEYEYP-------WW--GYAIGGFFTLSSTLLVPLWMIYLVGTTP-GSMRQRVRALCTPAEDLPD 571

  Fly   590 PSDPKKLMDYQMF--------LRNKDEENS 611
            |..||:.::...|        ||....:||
Zfish   572 PKCPKQKLNTATFETFTDLLTLRTVHIQNS 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 171/482 (35%)
slc6a22.2XP_005166102.1 SLC6sbd-TauT-like 28..565 CDD:271387 190/551 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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