DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and slc6a11a

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001091857.1 Gene:slc6a11a / 558960 ZFINID:ZDB-GENE-030131-3729 Length:590 Species:Danio rerio


Alignment Length:600 Identity:207/600 - (34%)
Similarity:325/600 - (54%) Gaps:46/600 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 ESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPI 104
            :.::::|:.  |..|.:.:|||::.....:|||||||||:...:||||||.|||::.|...|.|:
Zfish    12 QQADITPEE--RGQWANKIEFLLTVAGAIIGLGNVWRFPYLCYKNGGGAFFIPYVLYLVTCGIPL 74

  Fly   105 YYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPW 168
            :.:|..|||::|:|.:..: ...||..|:|||..|.:...:..|..::|....|.|.||..||||
Zfish    75 FVLETSLGQYTSQGGIMCWRKVCPLFEGMGYASQLIIVYGSITYIIIIAWAFLYLFSSFNVELPW 139

  Fly   169 SFCREEWG-DGCVSASG-------GQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGS 225
            :.|...|. |.|:..||       ..||      |.|||...:....||..:..:|. :|.....
Zfish   140 ASCNNPWNTDTCIVLSGRNSSSELASPL------NSSSSVMEFWHHRVLRLSSGVEH-LGTVRWD 197

  Fly   226 LALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEK 290
            |||:|.:.|:.|...|.:||||:|||.|..|.||||::.|||:|.:|||||.:|:.|::.|...:
Zfish   198 LALILLLVWILVYFCIWKGVKSTGKAVYFTATFPYVMLLILLLRGVTLPGALNGIYYYMYPDLTR 262

  Fly   291 LLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILG 355
            |.:||||.:|.||:|:|.|:|.|.:....|||::.:|.|||:..:..|::.||.|.|..||.:||
Zfish   263 LADPQVWMDAGTQIFYSYAICLGYLSSLGSYNQYNNNCYRDSFYLCLLNSGTSFLGGFAIFSVLG 327

  Fly   356 NLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFP--QVFSLLFFAMLFMLGVGSN-VGMVSC 417
            ::|.|.|. ||:.|.::||||.||.||.|:.   |.|  |.:::.||.|:.:||:.|. ||:.| 
Zfish   328 HMAQEQGV-DISLVAESGPGLVFIVYPQAVT---MLPLSQFWAVCFFIMIILLGLDSQFVGLES- 387

  Fly   418 IMTVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFH---GVTFVSLVSA 474
            |||.:.|.|..|     :..::::.:.::.:.:||:.||.||.:||.|.|.:   |.|.:.|  |
Zfish   388 IMTSVTDIFPTVLRRGFRREMLLLGICLVCYFMGLLMITEGGLYIIQLFDHYVCSGTTLLFL--A 450

  Fly   475 IFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQ-E 538
            ..:.:|:||:||..|..::.:.|:..|.....:.||..|||.|.:...::||:...||.:|.: .
Zfish   451 TCQSVAIGWVYGADRFYENIQDMIGYKPWPMVKYCWLYVTPSVCVGTFIFSLVKYSPLKFNNKYM 515

  Fly   539 FPLVYRVVGWCVS----GCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPKKLMDY 599
            :|.....:||.::    ..|...:.|     ...:.||:...|:..:..|..|...|.......|
Zfish   516 YPWWAYGIGWFLAVSSLSLIPINMIY-----KLHKGKGTFWERLQLACSPAEDLPQSQRPSAHHY 575

  Fly   600 QMFLRNKDEENSKNV 614
            .:......|::..|:
Zfish   576 TLSASTDREKSPDNL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 186/493 (38%)
slc6a11aNP_001091857.1 SLC6sbd-TauT-like 21..560 CDD:271387 200/557 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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