DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a6a

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001119858.1 Gene:slc6a6a / 556480 ZFINID:ZDB-GENE-081104-1 Length:625 Species:Danio rerio


Alignment Length:603 Identity:210/603 - (34%)
Similarity:334/603 - (55%) Gaps:43/603 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KPSLLPMALESSELSPDRKA------RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAF 89
            |.:|.|...:|....|:.:|      |:.|.|.|:|::|.....||||||||||:...:||||||
Zfish    15 KDTLKPSPGKSPGTRPEDEAEGKAPQREKWASKLDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAF 79

  Fly    90 LIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMAL 153
            ||||.:.||..|.|::::|:.||||:|.|.:..: ...|:..|:|||.::.:.:|..||..::|.
Zfish    80 LIPYFIFLFGGGLPVFFLEVALGQFTSEGGITCWGKLCPIFTGIGYASIIIVSLLNIYYIVILAW 144

  Fly   154 TLRYFFDSFASELPWSFCREEWG-DGCVSASGGQPLQGQLS---RNFSSSTQLYLQRIVLNETDS 214
            .|.|....|..||||:.||..|. :.||..:..:.....||   .||:|....:.:|.||:.:..
Zfish   145 GLYYLLQCFQHELPWARCRHSWNTENCVEDTVRKNKTLWLSANATNFTSPVTEFWERNVLSISSG 209

  Fly   215 LEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDG 279
            ::| :|.....|||.|...|:.....|.:||||:||..|..|.||::::.:||:|.:|||||.:|
Zfish   210 IDE-VGGLKWELALCLLAVWVICFFCIWKGVKSTGKVVYFTATFPFLMLIVLLIRGVTLPGATEG 273

  Fly   280 VMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSL 344
            :.::|.|...:|.:|:||.:|.||:|||.|:|.|.:....|||::.:|.|||..::..|::.||.
Zfish   274 IKFYLYPDLSRLKDPEVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNCYRDCMLLGCLNSGTSF 338

  Fly   345 LSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVG 409
            :||..||.:||.:|.|.|.. ||.|.::|||||||:||.|:....: |.|:::|||.||.:||:.
Zfish   339 VSGFAIFSVLGFMAQEQGIA-IADVAESGPGLAFIAYPKAVTMMPL-PTVWAILFFIMLLLLGLD 401

  Fly   410 SNVGMVSCIMTVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFV 469
            |....|...:|.|.|.:.::     :..|.:..:.||.:|:||..:|.||.::..|.|::..:.|
Zfish   402 SQFVEVEGQITSLVDLYPSLLRKGYRREIFIAVICVISYLLGLTMVTKGGMYVFQLFDYYAASGV 466

  Fly   470 SLV-SAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLS 533
            .|: .|.||.:||.|:||........|.|:..:.:::.:..|.::||::.:...|:||:..:||:
Zfish   467 CLLWVAFFECVAVAWVYGADNFYDAIEDMIGYRPNSWMKWSWMLITPVLCVGCFVFSLVKYKPLT 531

  Fly   534 YNG-QEFPLVYRVVGW--------CVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWG 589
            ||. .::|.....:||        |:...::.::.         |..|||..||.....|.....
Zfish   532 YNKLYKYPDWSIGLGWALALASMICIPMMVVIKII---------QSDGSLIERIKAVAAPVKGGA 587

  Fly   590 PSDPKKLMDYQMFLRNKD 607
            .|.||   :|.  |:|.:
Zfish   588 SSRPK---EYS--LKNSE 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 180/484 (37%)
slc6a6aNP_001119858.1 SLC6sbd_TauT 41..582 CDD:271398 197/552 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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