DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a16a

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_021327051.1 Gene:slc6a16a / 555229 ZFINID:ZDB-GENE-061009-43 Length:693 Species:Danio rerio


Alignment Length:651 Identity:200/651 - (30%)
Similarity:317/651 - (48%) Gaps:109/651 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ALLKPSLLPMALESSE---------LSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALE 83
            ::|..|...|||.|::         ...||.|   |.|.|:::::.:..|||||||||||:...:
Zfish    13 SVLTESRSDMALVSADDEGSAGADGQEDDRPA---WDSKLQYVLAQVGFSVGLGNVWRFPYLCHQ 74

  Fly    84 NGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYY 147
            ||||||::.|:::|.::|.|:::||:..||...:|.:.|: ..:|.:.|:||:..:....:|.||
Zfish    75 NGGGAFMLLYVMLLLIIGVPLFFMELAAGQSIRQGSIGVWKHISPRLAGIGYSSCMVCFFVALYY 139

  Fly   148 ASVMALTLRYFFDSFASELPWSFCREEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNET 212
            ..::|.:|.|..:||...|||..|.       |.....|.::...:   ||.|..:..|..|:.:
Zfish   140 NVIIAWSLFYMGNSFQYPLPWEQCP-------VDMISNQTVKECAA---SSPTSYFWFRKALDIS 194

  Fly   213 DSLEEGIGYPSGSL-ALMLG---ISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTL 273
            ||:::     ||.. .:|.|   .:|..|.|.:|:|:|||.|..|..::|||.|:...|:|.|.|
Zfish   195 DSIDQ-----SGEFNPIMTGCLLAAWAIVCLAMIKGIKSSAKVMYFSSVFPYAVLICFLIRGLML 254

  Fly   274 PGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTL 338
            .||.||:.|...|:.|...|.|||..|.|||||:|.:.:|.:|.|||||...:|.:|||.:|:.:
Zfish   255 DGAIDGIKYMFYPKVEIWGEVQVWRQAATQVFFALGLGYGSVIAYSSYNPIHNNCHRDAIMVSGI 319

  Fly   339 DTFTSLLSGVIIFGILG----NLAHESGTKDIASVVK---------------------------- 371
            :..||:|:.:::|.:||    |:|.:....::|.:.:                            
Zfish   320 NFMTSVLASLVVFVVLGFRAKNIALDCVATNVARMAEMAQTGSSQHWRPLFNMSDPKSVVLQDYR 384

  Fly   372 ---------------------------AGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVG 409
                                       .|.|||||::.:|:|.|...| .:|.|||.||..||:.
Zfish   385 QWYSSYGSLLGSNITDCDLEREMSKGVEGTGLAFIAFTEAMALFPASP-FWSTLFFLMLLNLGLS 448

  Fly   410 SNVGMVSCIMTVLKDQF--VNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLV 472
            :..|.:..|:|.|.|.|  :.....::.|...::|||:||::....|.:.:|:.|.:..|...::
Zfish   449 TMFGTMQGILTPLMDNFRVLGRHKTMLTVCSCILGFLIGLLFTQRSGNYFVTMFDDYSATLPLII 513

  Fly   473 SAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTM---RP--L 532
            ..|||.::|.||||..|...|.|.||:.:....||..|..|..|.|:.:|..|||.|   ||  .
Zfish   514 VVIFETVSVAWIYGADRFLDDVEVMLHWRPPVVYRYLWKYVCLLGMVGLLAASLLRMVFKRPTYT 578

  Fly   533 SYN---GQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPK 594
            ::|   |.|..|.|  .||.:  .::..|..   .|:...|.|.|.|.:...:....:.|...|.
Zfish   579 AWNHTTGSEASLEY--PGWAL--VVLSMLII---VASLPVPIGYLLSFLRGGLNLPVEEGEIQPP 636

  Fly   595 K 595
            :
Zfish   637 R 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 170/539 (32%)
slc6a16aXP_021327051.1 SLC6sbd-B0AT-like 42..617 CDD:271364 189/600 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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