DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a19a.1

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001091648.1 Gene:slc6a19a.1 / 553256 ZFINID:ZDB-GENE-070620-2 Length:629 Species:Danio rerio


Alignment Length:604 Identity:183/604 - (30%)
Similarity:305/604 - (50%) Gaps:99/604 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKP 103
            ||..||. :...|..|.:..:::::|:...||||||||||:....:|||||:||:|::|.:.|.|
Zfish    20 LEKLELQ-EAGERPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVLEGVP 83

  Fly   104 IYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELP 167
            :.::|..:||....|.|.|: ..:|.:.|||.|.:||..::..||.::||..:.|.|:|....||
Zfish    84 LLHLEFAIGQRLRSGSVGVWRSISPYLTGVGIASMLASFIVGMYYNTIMAWVMWYLFNSLQEPLP 148

  Fly   168 WSFCREEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGS----LAL 228
            ||.|...     ::.:|   |..:..|  ||....:..|..||.:.::|:     ||:    |.|
Zfish   149 WSQCPVN-----LNRTG---LVSECER--SSPVDYFWYRETLNTSTAIED-----SGALQWWLVL 198

  Fly   229 MLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEKLLE 293
            .|..:|..:.:..|||::::|||.|:.:..||||:.|.|:|||||.|:.:|:.:..||...:|:.
Zfish   199 CLLCAWTFLYICCIRGIETTGKAVYITSTLPYVVLTIFLIRALTLKGSVNGIKFLFTPDVNELMN 263

  Fly   294 PQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILGNLA 358
            |..|.:|..||.||.::.||.:|.:||||...:|..:||..::.::..||:.|..:|:.|:|..|
Zfish   264 PSTWLDAGAQVLFSFSLAFGGLISFSSYNSVHNNCEQDAVTISIINGLTSVYSATVIYSIIGFRA 328

  Fly   359 HESG----TKDIASVVKA----------------------------------------------- 372
            .|:.    ..:|.|::.|                                               
Zfish   329 TENYDICLDSNILSLLNAFDLPEGSITENNYTVALQQLNISRPDIIQELQLKTCDMQTLLSEGVE 393

  Fly   373 GPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVKLW---II 434
            |.|||||.:.:||.|..:.| ::|:|||.|||.||:.:..|.:..::..|:|..:..|.|   :.
Zfish   394 GTGLAFIVFTEAITKMPVSP-LWSVLFFIMLFCLGLSTMFGNIEGVVVPLQDLNLLPKRWPKEVF 457

  Fly   435 VVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLN 499
            .....|:.||..|:::...|.:.:.|.|....:...||.|:.|||||.::||..|..:|.::|:.
Zfish   458 TGLTCVVSFLTALVFVQSSGNYWLALFDGFAGSIPLLVIALCELIAVVYVYGIDRFNEDIKFMVG 522

  Fly   500 IKTSNYYRICWSIVTPLVMLVILVYSLLT--MRPLSYN-----GQEFPLVYRV--VGW------- 548
            .|.:.:::|.|..::|:::||||::..:|  .:.|:||     ..:||.:..|  ..|       
Zfish   523 HKPNIFWQISWRFLSPVILLVILIFYFITTVSKQLTYNVWDPQSADFPTLKEVDYPNWISVVIFV 587

  Fly   549 -------CVSGCIIGQLFY 560
                   |:.|..||:..:
Zfish   588 LAGVPSLCIPGVAIGRALW 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 166/532 (31%)
slc6a19a.1NP_001091648.1 SLC5-6-like_sbd 31..611 CDD:294310 179/592 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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