DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and SLC6A20

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001372612.1 Gene:SLC6A20 / 54716 HGNCID:30927 Length:603 Species:Homo sapiens


Alignment Length:635 Identity:194/635 - (30%)
Similarity:310/635 - (48%) Gaps:126/635 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQ 113
            |||..|.:||:|:.:||:.:||||||||||:.....|||:||:||:::|.|.|.|:.|:|:.:||
Human     3 KARPLWANSLQFVFACISYAVGLGNVWRFPYLCQMYGGGSFLVPYIIMLIVEGMPLLYLELAVGQ 67

  Fly   114 FSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWGD 177
            ...:|.:..: ..:|.:.|||.|.::....|:.||..:.|....|.|.||...||||.|      
Human    68 RMRQGSIGAWRTISPYLSGVGVASVVVSFFLSMYYNVINAWAFWYLFHSFQDPLPWSVC------ 126

  Fly   178 GCVSASGGQPLQGQLSR-----NFSSSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLGISWLTV 237
                     ||.|..:.     ..:||||.:..|..||.:.||:|. |......||.|.::||.|
Human   127 ---------PLNGNHTGYDEECEKASSTQYFWYRKTLNISPSLQEN-GGVQWEPALCLLLAWLVV 181

  Fly   238 TLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTP-----------QWEKL 291
            .|.|:||.:|:||..|..|..||.|:.|.|:|.|||.||.:|:||..||           |.|:|
Human   182 YLCILRGTESTGKVVYFTASLPYCVLIIYLIRGLTLHGATNGLMYMFTPKGSSALSLLAFQIEQL 246

  Fly   292 LEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILG- 355
            ..|:.|.||.||:||||.:.||.:|.::|||...:|..:.|.||:.:::|||:.:.::.|.|.| 
Human   247 ANPKAWINAATQIFFSLGLGFGSLIAFASYNEPSNNCQKHAIIVSLINSFTSIFASIVTFSIYGF 311

  Fly   356 -------------------------------NL---------AHESGTKDIASVVK--------- 371
                                           ||         |:.|...::...:|         
Human   312 KATFNYENCLKKVSLLLTNTFDLEDGFLTASNLEQVKGYLASAYPSKYSEMFPQIKNCSLESELD 376

  Fly   372 ---AGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKD-QFVNVKLW 432
               .|.|||||.|.:||...:: .|::|:|:|.||.|||:||.:|..:.|:|.|.| :.::..|.
Human   377 TAVQGTGLAFIVYTEAIKNMEV-SQLWSVLYFFMLLMLGIGSMLGNTAAILTPLTDSKIISSHLP 440

  Fly   433 IIVVS--LSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAE 495
            ...:|  :.::...:|:::....|.:...:.:.:..|...|:..:.|.|||.::||.:|...|.:
Human   441 KEAISGLVCLVNCAIGMVFTMEAGNYWFDIFNDYAATLSLLLIVLVETIAVCYVYGLRRFESDLK 505

  Fly   496 YMLNIKTSNYYRICWSIVTPLVMLVILVYSLL------TMRPLSYNGQEFPLVYR--------VV 546
            .|.....|.|:::.|:.|:||:::.:.|:.|.      |::..:::..:..||.:        |:
Human   506 AMTGRAVSWYWKVMWAGVSPLLIVSLFVFYLSDYILTGTLKYQAWDASQGQLVTKDYPAYALAVI 570

  Fly   547 GWCVSG---CIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDP 593
            |..|:.   ||               |..:|.:.:...:|.    |.:||
Human   571 GLLVASSTMCI---------------PLAALGTFVQRRLKR----GDADP 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 176/546 (32%)
SLC6A20NP_001372612.1 SLC6sbd_SIT1 2..588 CDD:271401 190/616 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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