DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a1b

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:569 Identity:207/569 - (36%)
Similarity:335/569 - (58%) Gaps:37/569 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KPSLLPMALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLV 95
            ||..|.:.::..:..||   |:.|....:||:||:..::|||||||||:...:||||||||||.:
Zfish    26 KPKTLVVKVQKKKELPD---RETWQGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFL 87

  Fly    96 VLFVVGKPIYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFD 160
            .|...|.|::::|..|||::|.|.:.|:..||:.:|||.|..:....|..||..::|..:.|.::
Zfish    88 TLIFAGVPLFFLETALGQYTSIGGLGVWKLAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYN 152

  Fly   161 SFASELPWSFCREEWG-DGCVS----ASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEE--G 218
            ||.::|||..|...|. |.|.|    |:.|         |.:|:...:.:|.:...||.||:  .
Zfish   153 SFTTDLPWKSCDNPWNTDKCFSNYSMANIG---------NMTSAVVEFWERNMHQLTDGLEKPGE 208

  Fly   219 IGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYF 283
            |..|   ||:.|.|:|:.|...|.:||..:||..|..|.:||.::|||.:|.:|||||.:|::::
Zfish   209 IRLP---LAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFILFIRGVTLPGAKEGILFY 270

  Fly   284 LTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGV 348
            :||::.||.|.:||.:|.||:|||..:..|.:|...|||.|.:|||:|:.||..:::|||:.:|.
Zfish   271 VTPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYKDSIIVCCINSFTSMFAGF 335

  Fly   349 IIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVG 413
            :||.|:|.:||.: .:.||.|..:||||||::||:|:.:..:.| ::::|||:||.|||:.|...
Zfish   336 VIFSIVGFMAHIT-KRPIADVAASGPGLAFLAYPEAVTQLPISP-LWAVLFFSMLLMLGIDSQFC 398

  Fly   414 MVSCIMTVLKDQFVNV-----KLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVS 473
            .|...:|.|.|:|...     :::|.||.|  :.:|:||..||.||.::..|.|::..:.:.|:.
Zfish   399 TVEGFITALVDEFPRALRGRREIFIAVVCL--VSYLIGLSNITQGGLYVFKLFDYYSASGMCLLF 461

  Fly   474 AI-FELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQ 537
            .: ||.:::.|.||..:...:.|.|:..|...::::||.:.|||::..:.::|.:.|.||:.|..
Zfish   462 LVFFECVSISWFYGVNKFYGNLEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNY 526

  Fly   538 EFPLVYRVVGWCVSGCIIGQLFYWAGYAN--FKQPKGSLKSRINNSIKP 584
            .||...:.||||::   :..:....||..  |...|||.|.|:...|:|
Zfish   527 VFPKWGQGVGWCMA---LSSMVLIPGYMGYMFLTLKGSYKERLRIMIQP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 180/486 (37%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 207/569 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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