DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and CG43066

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster


Alignment Length:692 Identity:200/692 - (28%)
Similarity:319/692 - (46%) Gaps:145/692 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGK 102
            :::|.::..:...|..|...::|.:|.|..||||||:||||:...:|||||||||::|:|.:.|.
  Fly    42 SVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGI 106

  Fly   103 PIYYMEMLLGQFSSRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASEL 166
            |::.:|:.:||....|.:.|:: ..|.:.|:|.:..:....:|.||..::.....|.|:||...|
  Fly   107 PLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPL 171

  Fly   167 PWSFCREEWGDGCVSASGGQPLQG------QLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGS 225
            |||.|               ||.|      :.::  ||.|..:..|..|:...|::|    |.|.
  Fly   172 PWSSC---------------PLNGTGFELEECAK--SSETTYFWYRTTLDAAPSMDE----PGGL 215

  Fly   226 ---LALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQ 287
               :.|.|.:||..|..|:::|::||||..|..:||||:|:.|..:|.:||.||..|:|:..||:
  Fly   216 KWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPK 280

  Fly   288 WEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFG 352
            .||||||.||.:|.||||:|..:.||.:|.:.|||...:|..||..:|:..:..|::.:.|:||.
  Fly   281 VEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFA 345

  Fly   353 ILG----------------------------------------------------NLAHESGTKD 365
            |||                                                    :||||   .|
  Fly   346 ILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHE---LD 407

  Fly   366 IASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFV--N 428
            .|:   .|.|||||.:..||.:....| .:::|||.||..||:||.:|::..::..|.|..:  .
  Fly   408 NAA---EGTGLAFIVFTQAIVELPGAP-FWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKR 468

  Fly   429 VKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQD 493
            ||...:...:.:..|:||.|:.|..|::.:.:.|....|...:|.|:.|:|||.:|||.:|..:|
  Fly   469 VKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTED 533

  Fly   494 AEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTM--RPLSYNG----------QEFPLVYRVV 546
            ...|...:...|::..|..:.|::|:.|||.|::.|  |..:|..          :.:|  ..|:
  Fly   534 IFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVIRNPTYGAWNADLGMIEQKSYP--NWVM 596

  Fly   547 GWCVSGCIIGQL-----FYWAGYANFK-------------QPKGSLKSRINNS------------ 581
            |..:|..:.|.|     |....:...|             :...|.|..|:|.            
  Fly   597 GIALSMILAGVLPMPIVFLMRSFQCLKVDLDIHQGSIRRNETTASTKEMIDNDDDDDEDDENDFS 661

  Fly   582 -------IKPHSDWGPSD--PKKLMDYQMFLRNKDEENSKNV 614
                   :|..||:...|  .|.:....|.:|......:.||
  Fly   662 GPALGGHVKTQSDFSDDDEEDKPMTMRMMMMRPTTTTKTSNV 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 173/537 (32%)
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 185/591 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440728
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.