DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and DAT

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001261026.1 Gene:DAT / 36849 FlyBaseID:FBgn0034136 Length:644 Species:Drosophila melanogaster


Alignment Length:580 Identity:209/580 - (36%)
Similarity:314/580 - (54%) Gaps:50/580 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLGQFS 115
            |:.|...::||:|.|..:|.|.||||||:...:|||||||:||.::|.|.|.|::|||:.|||.:
  Fly    27 RETWSGKVDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYGIMLVVGGIPLFYMELALGQHN 91

  Fly   116 SRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG-DG 178
            .:|.:..:. ..||.:|:|||.:|....:..||..::|.:||:||.||.:.|||:.|...|. ..
  Fly    92 RKGAITCWGRLVPLFKGIGYAVVLIAFYVDFYYNVIIAWSLRFFFASFTNSLPWTSCNNIWNTPN 156

  Fly   179 C-------------------VSASGGQPL----------------QGQLSRNFSSSTQLYLQRIV 208
            |                   :.|.|.|.|                .|.: ..|.|:...|..|.:
  Fly   157 CRPFESQNASRVPVIGNYSDLYAMGNQSLLYNETYMNGSSLDTSAVGHV-EGFQSAASEYFNRYI 220

  Fly   209 --LNETDSLEEGIGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRAL 271
              ||.::.:.: :|.....:||.|.|.:|.....:.:|:.:|||..:..|||||.|:.|||:|.|
  Fly   221 LELNRSEGIHD-LGAIKWDMALCLLIVYLICYFSLWKGISTSGKVVWFTALFPYAVLLILLIRGL 284

  Fly   272 TLPGAYDGVMYFLTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVT 336
            ||||::.|:.|:|||.:..:.:.:||.:|.|||||||...|||::.|:|||::.:|||:||.:.:
  Fly   285 TLPGSFLGIQYYLTPNFSAIYKAEVWVDAATQVFFSLGPGFGVLLAYASYNKYHNNVYKDALLTS 349

  Fly   337 TLDTFTSLLSGVIIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFA 401
            .:::.||.::|.:||.:||.:||..|.: |..|...||||.|:.||.|||.... ...::|:||.
  Fly   350 FINSATSFIAGFVIFSVLGYMAHTLGVR-IEDVATEGPGLVFVVYPAAIATMPA-STFWALIFFM 412

  Fly   402 MLFMLGVGSNVGMVSCIMTVLKDQFVNVK--LWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFH 464
            ||..||:.|:.|....|:|.|.|:|..:|  ..:.|..|..:.|:|||...|.||.:...|:|.:
  Fly   413 MLLTLGLDSSFGGSEAIITALSDEFPKIKRNRELFVAGLFSLYFVVGLASCTQGGFYFFHLLDRY 477

  Fly   465 GVTFVSLVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTM 529
            ...:..||:..||.|||.|||||.|..:|...|:......|:::||..|.|:.:|.|.||.|:..
  Fly   478 AAGYSILVAVFFEAIAVSWIYGTNRFSEDIRDMIGFPPGRYWQVCWRFVAPIFLLFITVYGLIGY 542

  Fly   530 RPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFK--QPKGSLKSRINNSIKPHSD 587
            .||:|....:|.....:|||::|..:..:   ...|.||  ...|||:.|......|..|
  Fly   543 EPLTYADYVYPSWANALGWCIAGSSVVMI---PAVAIFKLLSTPGSLRQRFTILTTPWRD 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 190/514 (37%)
DATNP_001261026.1 SLC6sbd_SERT-like_u1 27..597 CDD:271405 207/576 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440750
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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