DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and CG15279

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_609726.1 Gene:CG15279 / 34863 FlyBaseID:FBgn0028886 Length:639 Species:Drosophila melanogaster


Alignment Length:607 Identity:327/607 - (53%)
Similarity:427/607 - (70%) Gaps:27/607 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SPDRKA------RDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKP 103
            |.|::|      |..||..:||||||||:|||||||||||||||:|||||||||||:|||::|||
  Fly    38 SDDQEAAKVPEERATWGKGVEFLMSCIAMSVGLGNVWRFPFTALDNGGGAFLIPYLIVLFLIGKP 102

  Fly   104 IYYMEMLLGQFSSRGIVQVFDFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASELPW 168
            |||:||::|||||||.|:|||..|.|:|||..|...:.:|:||||:::|:..|||.:||.:.|||
  Fly   103 IYYLEMVIGQFSSRGSVKVFDLCPAMKGVGAGQAFQVFMLSTYYAALVAIIGRYFIESFRNPLPW 167

  Fly   169 SFCREEWGDGCVS----ASGGQPLQG--QLSRNFS---------SSTQLYLQRIVLNETDSLEEG 218
            |.||.|||..|::    ||....|:.  |..:|::         :|::.|..:.||:|..::|||
  Fly   168 STCRAEWGIHCINSAPDASNWSQLESNDQRPQNYTMKSQNDRVITSSEWYFVKEVLHEKPNIEEG 232

  Fly   219 IGYPSGSLALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYF 283
            ||.|:..|.:.|.|:|..|..||.|||||||||:|.|||||||:|.:|||||:||||:.||:.||
  Fly   233 IGLPNWELVIGLFIAWSCVFFIIRRGVKSSGKASYFLALFPYVIMGVLLVRAVTLPGSIDGIYYF 297

  Fly   284 LTPQWEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGV 348
            :.|||.|:|:|:|||.||||.|:||:||||.||||||:|:|||||:|||.|||.|||.||||:|.
  Fly   298 IKPQWGKILDPKVWYAAVTQCFYSLSVCFGNIIMYSSFNKFGHNVHRDAAIVTGLDTMTSLLAGF 362

  Fly   349 IIFGILGNLAHESGTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVG 413
            .||||||:||||.||.||.||||.|.|||||||||||||||..||:||:|||.|||:||:|||:.
  Fly   363 TIFGILGHLAHEIGTDDIGSVVKGGAGLAFISYPDAIAKFKNLPQIFSVLFFLMLFVLGIGSNIA 427

  Fly   414 MVSCIMTVLKDQFVNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFEL 478
            |.||.:|.::|:|.|...|...:.::|:.|.:||:|||||||:::||:||.|.:.::||..|.||
  Fly   428 MTSCSVTAIRDRFPNFGQWQCSLLIAVVSFFIGLMYITPGGQYMLTLVDFFGASMIALVLGIAEL 492

  Fly   479 IAVGWIYGTKRLCQDAEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTMRPLSYNGQEFPLVY 543
            ..:||||||.|||:|.|:||..|...|:|:||||:|||:|.|||:|...|.:||:||...:|...
  Fly   493 YTIGWIYGTDRLCKDIEFMLGRKVGLYWRLCWSIITPLIMTVILIYFYATYQPLTYNNIVYPNWS 557

  Fly   544 RVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSRINNSIKPHSDWGPSDPKKLMDYQMFLRNKDE 608
            ..:||.::...|.||..|...|..:.|..:|.::|..:..|..:||||||.....|     :|:.
  Fly   558 YSIGWLITAFGILQLPIWMIVAIVRDPGQTLGAKIRGAFTPKKNWGPSDPLLREQY-----HKEI 617

  Fly   609 ENSKNVNRRCVCYTA-GDRIFG 629
            ||.....|....:.| ...|||
  Fly   618 ENELTPKRGQGIWAAIKQNIFG 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 291/488 (60%)
CG15279NP_609726.1 SLC5-6-like_sbd 50..598 CDD:294310 308/547 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469617
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D14202at7147
OrthoFinder 1 1.000 - - FOG0008552
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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