DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4476 and CG13796

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001137807.1 Gene:CG13796 / 34051 FlyBaseID:FBgn0031939 Length:641 Species:Drosophila melanogaster


Alignment Length:608 Identity:145/608 - (23%)
Similarity:246/608 - (40%) Gaps:122/608 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KARDNWGSSLEF-LMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGKPIYYMEMLLG 112
            |.|..|..|.:| ..||......|.......|..|..|...|:|.||:.:.....||:.::..||
  Fly    82 KCRGRWAKSADFYFASCTHAFSSLIFSELSTFGILHGGWLLFIIAYLMGMLFYSLPIFLIQAFLG 146

  Fly   113 QFSSRGIVQVFDFAPLMRGVGYA-QLLALGVLATYYASVMALTLRYFFDSFASELPWSFCREEWG 176
            ||||.|.:..|..||:.:|:||| .||.||.| |||:....:.|.|..:|....:||..|...|.
  Fly   147 QFSSSGTISAFRVAPIFKGIGYAILLLNLGTL-TYYSIAAVVPLIYTVNSIHPVIPWMSCNNSWN 210

  Fly   177 -DGCVSASGGQPLQGQLSRNFS---------SSTQLYLQRIVLNETDSLEEGIGYPSGSLALMLG 231
             ..|           .|..|:.         |:.:.:...|.     |..:|....|.|.::::|
  Fly   211 TQEC-----------SLHENYDVDDYRVDPHSTVEFFRSMIA-----STAKGSTSMSISWSMLIG 259

  Fly   232 I--SWLTVTLIIIRGVKSSGK-----AAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWE 289
            :  .||.|..::::.|...||     ...:...|..|.:::|:...:|    :|.:.|:..||.:
  Fly   260 VLSIWLVVLALLLKPVAFIGKVLRCSCVLMFGFFVAVFLYLLIHEQVT----FDTLHYYWMPQLD 320

  Fly   290 KLLEPQVWYNAVTQVFF---SLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIF 351
            ..  ..:...|.|.:..   :|...:|.||..||||.|    .|||..::.....|.:..|  :.
  Fly   321 SF--DSILATARTALLMAGGALGPGWGSIITLSSYNNF----RRDAERLSIWVCLTHITIG--LM 377

  Fly   352 GIL-GNLAHES-----GTKDIASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGS 410
            |:| .|:||:.     |...:....|......::.:.....:|...|.:::.|||.|:|:..:.:
  Fly   378 GLLCCNVAHDHFEDHVGMMPLHVDEKHHMQFLYLCFSYLFGRFTTTPNLWAFLFFGMIFLSELCA 442

  Fly   411 NVGMVSCIMTVLKDQFVNVKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVS----- 470
            .:..:..::|.|.|:|..::...|:|..|::      ..:|....:..|.:.|..:|.:.     
  Fly   443 LIIQMMSVITALFDEFETLRSRRILVISSLV------FCLTASSVYFCTQLGFSQLTQLPNLAVF 501

  Fly   471 ---LVSAIFELIAVGWIYGTKRLCQDAEYMLNIKTSNYYRICW-SIVTPLVMLV----------- 520
               |:|.|..|:.. |:||..|...|.::||. ||.:.::|.: ...||:.:.:           
  Fly   502 THLLISGILVLMTT-WVYGRVRFQCDLQFMLG-KTISSFKIFFIRFATPIFLGLCLFQLTYLFTR 564

  Fly   521 -----ILVY---SLLTMRPLSYNGQEFPLVYRVVGWCVSGCIIGQLFYWAGYANFKQPKGSLKSR 577
                 :|:|   .|:.:..:||      :||:|       |               :..|..:.|
  Fly   565 DRIHDVLIYVSQGLILLTAISY------MVYKV-------C---------------RTNGDWRQR 601

  Fly   578 INNSIKPHSDWGPSDPKKLMDYQ 600
            :...:.|| ||.|.|......|:
  Fly   602 LQQCLAPH-DWHPVDADNRRFYE 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 127/529 (24%)
CG13796NP_001137807.1 SLC5-6-like_sbd 123..610 CDD:294310 129/552 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440784
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D250396at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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