DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4476 and slc6a19b

DIOPT Version :9

Sequence 1:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_956030.1 Gene:slc6a19b / 326030 ZFINID:ZDB-GENE-030131-4755 Length:651 Species:Danio rerio


Alignment Length:649 Identity:188/649 - (28%)
Similarity:319/649 - (49%) Gaps:103/649 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGK 102
            |||..|:. :...|..|.:..:::::|:...||||||||||:....:|||||:||:|::|...|.
Zfish    21 ALERLEVE-EAGDRPKWDNKAQYMLTCVGFCVGLGNVWRFPYLCQSHGGGAFMIPFLILLVFEGI 84

  Fly   103 PIYYMEMLLGQFSSRGIVQVF-DFAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASEL 166
            |:.::|..:||...:|.|.|: ...|.|.|||.|.:....:::.||.:::|..:.|||:||...|
Zfish    85 PLLHLEFAIGQRLRKGSVGVWRTINPYMLGVGIASMCVSFLVSLYYNTIIAWVMWYFFNSFQDPL 149

  Fly   167 PWSFC--REEWGDGCVSASGGQPLQGQLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGSL--- 226
            |||.|  .|       :.:|..|..|:     ||....:..|..||.:.::::     :|.|   
Zfish   150 PWSQCPINE-------NRTGPIPECGK-----SSPVDYFWYRETLNTSAAIDD-----TGGLQVW 197

  Fly   227 -ALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQWEK 290
             .|.|..:|..:.:..|||::::|||.||.:..||:|:.|.|:|.|||.|:.||:.:..||...:
Zfish   198 MVLCLISAWAVLYVCCIRGIETTGKAVYVTSTLPYLVLTIFLIRGLTLKGSVDGIKFLFTPDINE 262

  Fly   291 LLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFGILG 355
            |..|..|.:|..|||:|.::.||.:|.:||||...:|..:||.|::.::.|||:.:..:|:.|:|
Zfish   263 LANPSTWLDAGAQVFYSFSLAFGGLISFSSYNSVHNNCEQDAVIISVINAFTSIYAATVIYSIIG 327

  Fly   356 NLAHE-------------------------------------SGTKDIASVVK------------ 371
            ..|.|                                     |.:.||.|.:.            
Zfish   328 FRATERFDDCMNGNILTLLNTFDLPEGFINQSNYQDVFQSLNSTSPDIISSLSLKTCDLNNFLSE 392

  Fly   372 --AGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFVNVKLW-- 432
              .|.|||||.:.:||.|..:.| ::|:|||.|||.||:.|..|.:..::..|:|..|..|.|  
Zfish   393 GVEGTGLAFIVFTEAITKMPLSP-LWSVLFFIMLFCLGLSSMFGNIEGVLVPLQDLGVFPKSWPK 456

  Fly   433 -IIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQDAEY 496
             ||.....::..|||||::...|.:.:.|.|....:...|:.|..|:|.|.::||..|..:|..:
Zfish   457 EIISGVTCLVCCLVGLIFVQGSGNYWLALFDSFAGSIPLLIIAFSEMIGVVYVYGIDRFNEDLIF 521

  Fly   497 MLNIKTSNYYRICWSIVTPLVMLVILV--YSLLTMRPLSYN-----GQEFPLVYR--------VV 546
            |:..|.:.:::..|..::||:||.|.|  :|....:.:.|:     .:.||.:.:        |:
Zfish   522 MIGHKPNIFWQATWRFISPLIMLAIFVFYFSTTVTKEIFYSAWDPESENFPTLEKKPYPTWIYVI 586

  Fly   547 GWCVSG----CIIGQLFYWA--GYANFKQPKGSLK--SRINNSIKPHSDWGPSDPKKLMDYQMF 602
            .:.::|    .:.|...:.|  .|...|.|..|::  ..::..::.|.:...:...:..|.:::
Zfish   587 IFLLAGVPSLAVPGTAVFRAIRDYCCKKHPSASIQQLDSVSYKVQMHDEEVKTQKTEKFDQKLY 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 169/536 (32%)
slc6a19bNP_956030.1 SLC6sbd_B0AT1 33..613 CDD:212085 179/597 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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